AMCG00020658


Basic Information

Item Value
gene id AMCG00020658
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 28137230 ~ 28147847 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020658
TCCCTGTTCACCAACAAGTCCATCTGCTCCCAAATATGGGAGCCCCTTGAGCTAATTTCTAGGAAAGATCAACCTCAACTTCCTGCCGTTTTCCGCCTTATAGAAGATAATGGAATCTGGGCCTTGGAGAAAAGTGGAAGAAAGCCCCATATTCCAAAGGAGAAATTTACTAATTCCTCTCTGCTAGACAAAAGTCCAGttaggaaaatgtattgtttcactCTGACACCACGTAGCGTTGATCACTTCGTGCCAACAGCCCAATACTTCCAGACGTCTCCAGAATCCCTGTTCATCCACGAGTCCATCTACTCCCTGCAGACGCCTACAGGGTTCAGAGCCCTCGTTGGTTTGACCGATAGTGAGGTCACCTTTAACTACCAGAATGGGGTTGACCTCTTCCAGATGTCCACTGTGACTGATGAAGAAGTGGAGAAGGTGCTTCAAGAAAAGTTTGGCATTGTGTTGGCTAATAAATgcaTTATTATTCTGAATGTGGGGAGGGGGCAGGATGGAGGAGAAGGGAGAAATAAGGGGAAGGGGGAACAAGGGGAAATAGGGAATGAGAAGAAGGAGAGGCTGGGCAGCAGCCAGAGTGGCAGGGACAGGACTATTGGGCCAGTGGAGAGAGGTGGAGAAAGTACCCCAGACCACTTATGGAGGCCCCGGAAAATGGGAGATGTGGAATTGAACTCCCCGGGCATGATGAACCTGAAAGAGTACTTTGAGAGGATTGGCTACAAGGGTCCCTTCAACAAGCCAGACCTGGAGACACTCAGCAGCATCCACAGGCATCACATCCAGTCCATCCCGTTTGAAAACCTGAGCATGCACTGTGGGGAGACTATCATCATTGACCTGGACATCATCTACAACAAGATAGTGAGAAGCAGTCGTGGGGGCTGGTGCTGCGAAAACAACCTGCTCTTCTCCTGGGTGTTGAAGGAGATGGGATACAAGTTCACAACCCTGGGGGCAAGAGTGTTTAACTGGCATACTAAAGATTATGGCAAATATGAGACCCACCTTATCAACCGAGTTGTCATTGATGGGATGTCATACGTAGCAGATGTGAGTTATGGGGTGTCTGGACAAATATGGGAGCCCCTTGAGCTAATTTCTGGGAAAGATCAACCTCAACTTCCTGCCGTTTTCCGCCTTATAGAAGATAATGGAATCTGGGCCTTGGAGAAAAGTGGAAGAAAGCCCCACATTCCAAATGAGAAATTTGCTAATTCCTCTCTGCTAGACAAAAGTCCAGttaggaaaatgtattgtttcactCTGACACCACGTAGCGTTGATCACTTCGTGCCAACAGCCCAATACCTCCAGACGTCTCCAGAATCCCTGTTCATCCACAAGTCCATCTGCTCCCTGCAGACGCCCACAGGGTTCAGAGCCCTCATTGGCTGGACGTACAGTGAGGTCACCTTTAACTACCAGGATGGGGTTGATCTCTTCCAGATGTCCACCATCCCAGATGAAGAAGTGGAAAAAGTTCTCAAAGAAATGTTTGGGCTGGTGTTGAAGCGCAAACTAGTTTGCATAAACCAGAAACCTTTCTTCACTCTC

Function

GO:

id name namespace
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
K00622 nat; arylamine N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020658 True 1575 mRNA 0.48 3 28137230 28147847

Neighbor

gene id symbol gene type direction distance location
AMCG00020653 NA coding downstream 101821 27863475 ~ 28035409 (-)
AMCG00020652 NA coding downstream 279612 27795256 ~ 27857618 (-)
AMCG00020651 NA coding downstream 351205 27752194 ~ 27786025 (-)
AMCG00020650 NA coding downstream 425526 27599214 ~ 27711704 (-)
AMCG00020649 NA coding downstream 613682 27522624 ~ 27523548 (-)
AMCG00020659 gpib,LOC108428767,LOC100196524,LOC103130839 coding upstream 103026 28250873 ~ 28265191 (-)
AMCG00020662 NA coding upstream 181138 28328985 ~ 28342177 (-)
AMCG00020664 kctd15,LOC107668486 coding upstream 283932 28431779 ~ 28450361 (-)
AMCG00020666 NA coding upstream 333635 28481482 ~ 28487871 (-)
AMCG00020669 cebpg coding upstream 656354 28804201 ~ 28804674 (-)
G64745 NA non-coding downstream 716584 27420366 ~ 27420646 (-)
G64708 NA non-coding downstream 900908 27236083 ~ 27236322 (-)
G64632 NA non-coding downstream 1391407 26745549 ~ 26745823 (-)
G64630 NA non-coding downstream 1404942 26731435 ~ 26732288 (-)
G64629 NA non-coding downstream 1407119 26729855 ~ 26730111 (-)
G64847 NA non-coding upstream 168922 28316769 ~ 28323164 (-)
G64886 NA non-coding upstream 710142 28857989 ~ 28858354 (-)
G64912 NA non-coding upstream 848545 28996392 ~ 29001633 (-)
G64991 LOC103376870 non-coding upstream 1111710 29259557 ~ 29314059 (-)
G65023 NA non-coding upstream 1737754 29885601 ~ 29885899 (-)
AMCG00020639 LOC107583916 other downstream 887554 27246014 ~ 27249676 (-)
AMCG00020613 NA other downstream 2188887 25934901 ~ 25948343 (-)
G64470 NA other downstream 2218600 25898428 ~ 25918630 (-)
AMCG00020614 NA other downstream 2231632 25886050 ~ 25905598 (-)
AMCG00020604 NA other downstream 2421773 25687275 ~ 25715457 (-)
AMCG00020657 NA other upstream 13755 28161602 ~ 28239074 (-)
G64811 NA other upstream 78688 28226535 ~ 28229647 (-)
AMCG00020661 ss18l2 other upstream 177190 28325037 ~ 28328312 (-)
G64882 NA other upstream 640733 28788580 ~ 28796956 (-)
G65000 NA other upstream 1233468 29381315 ~ 29405636 (-)

Expression


Co-expression Network