AMCG00020686


Basic Information

Item Value
gene id AMCG00020686
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 29487288 ~ 29504412 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020686
ATGACCAGTTGTGTCATTTTGGGGCTGGCGGACGACTCCGTGCGCAACGTGTCTGACAGGGAGTGCTGCTGTCAGGAAGCCATGGTGGAGGACGGCACTCGGAAGAGGAAAGGCACTCTAAATTGCAGTGTGGGGCCCTCCATGTACTCCAGGTCCCTGCACACTGAAGATGCAGTGAAAGCTACAGCACTAAAGAAAGATGTGGGGCTGATCAGCGGAATCTGTCTGGTTGTGGGCTCGATGATCGGCTCGGGCATTTTCATCTCTCCCAAGGCAGTGCTGGACTACACTGGAGCTGTGGGgccctgcctgtgtgtgtgggcaGCCTGTGGGGTCATATCCACTCTCGAGCACTCCTACTTAATGGCAGCCTTTGGGTCCATCCCGGCCTACCTGTACTCTTGGACTACCGTCATGGTCCTGAAACCTTCCAGCTTCGCCATCATCTCTCTCAGCTTCGCCAAGTATGCTGCCACCCCTTTCTACCCAGGATGCACCCCCCCTGACATGGCCACCAAGTGTCTGGCTGTTGCGGCCATCATGCTGATCTGCCTGTTGAATTGCCTCAGCGTCAAGCTGGTTACCTACGTACAGAACATCTTCACAGCCGCCAAGCTCCTGATCATCCTGGTCATTGTGGTGGCTGGGATGGTTCTTCTTGCTCAA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020686 True 666 mRNA 0.56 5 29487288 29504412

Neighbor

gene id symbol gene type direction distance location
AMCG00020680 NA coding downstream 19267 29464875 ~ 29468021 (-)
AMCG00020682 NA coding downstream 29637 29418816 ~ 29457651 (-)
AMCG00020681 NA coding downstream 118892 29336704 ~ 29368396 (-)
AMCG00020678 zgc:165481,LOC107657136,LOC107696720,LOC107554618,LOC107551474,LOC108432404 coding downstream 265886 29220680 ~ 29221402 (-)
AMCG00020675 NA coding downstream 346469 29135329 ~ 29140819 (-)
AMCG00020692 NA coding upstream 623807 30128219 ~ 30145527 (-)
AMCG00020693 NA coding upstream 860608 30365020 ~ 30420634 (-)
AMCG00020699 NA coding upstream 1253714 30758126 ~ 30760083 (-)
AMCG00020706 NA coding upstream 1635281 31139693 ~ 31143403 (-)
AMCG00020705 NA coding upstream 1641675 31146087 ~ 31151972 (-)
G64991 LOC103376870 non-coding downstream 173229 29259557 ~ 29314059 (-)
G64912 NA non-coding downstream 485655 28996392 ~ 29001633 (-)
G64886 NA non-coding downstream 628934 28857989 ~ 28858354 (-)
G64847 NA non-coding downstream 1164124 28316769 ~ 28323164 (-)
G64745 NA non-coding downstream 2066642 27420366 ~ 27420646 (-)
G65023 NA non-coding upstream 381189 29885601 ~ 29885899 (-)
G65033 NA non-coding upstream 478701 29983113 ~ 29983365 (-)
G65035 wwox,LOC107555694,LOC107742620,LOC107669551 non-coding upstream 622277 30126689 ~ 30390868 (-)
G65050 NA non-coding upstream 1030880 30535292 ~ 30535896 (-)
G65061 NA non-coding upstream 1112468 30616880 ~ 30617134 (-)
G65000 NA other downstream 81652 29381315 ~ 29405636 (-)
G64882 NA other downstream 690332 28788580 ~ 28796956 (-)
AMCG00020661 ss18l2 other downstream 1158976 28325037 ~ 28328312 (-)
AMCG00020657 NA other downstream 1248214 28161602 ~ 28239074 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other upstream 15779 29520191 ~ 29533117 (-)
AMCG00020694 wwox other upstream 945333 30449745 ~ 30531136 (-)
AMCG00020700 NA other upstream 1218371 30722783 ~ 30737976 (-)
AMCG00020702 NA other upstream 1296170 30800582 ~ 30808846 (-)
AMCG00020713 NA other upstream 1861251 31365663 ~ 31412823 (-)

Expression


Co-expression Network