AMCG00020701


Basic Information

Item Value
gene id AMCG00020701
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 30761959 ~ 30803517 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020701
ATGGAGAACGCCACGGCTCACTCTGCCGTGATCATGTTGCCTCCGAGAAACTGCATGCCCAGGAATTACAGCTGCATGGCCGGGCTGTTCGGGAGCTTGGCGTCGGCGAGCCAGAGGAAAGAAGATGGGGAGGAGGATAAAGACGGCTCCTGCGACTCGCTGGAGAACCACGTCGTGGAGGAGAGACCGAGAGGCAGGGAGTCCGTCTTCAAGCCCCCTCAGAGTCCCACTTTGCGCAGGAGAGCCAAGTCCCTGCCAGCCCCGTCCGAGAGAGCCAAGCTGGAGGTGGGGAGGGACCGCAGCCCGGCCAGCCAGAAGAAGGTAAGATTCGCCGACTCGCTCGGGTTGGAGCTCACCTCGGTGAAGCACTTCTGCAACGCCGACATGCCCGAGGTCCCGCAGCATGTCCTAGACAAGTTCAAGAAAGGACGCACGCCTAACCATTTTAACAATTTCGACATGTTCCCCAGAGTGCCTACCCAGTCCGTGTTCATGGAAACCCAGTTCATCAGTCCGGGCCACACGGCCGGCTTCCTGGAGCGCGTCCGGCAGGCCAAAGTGTCGCTGGAGGTCGTGGAAACGGACGAGTTCAGCTTGAGCGGCGTCGTGCGCGTTTTGAACGTGGCTTTCGAGAAGAGGGTGTTTCTGAGGTACAGCCTGAACAACTGGCTCACTTTCTCGGACGTGCCGGCCTCGTACGTCCCCAACTCCAGTGACGGGTTGACTGACAAGTTCTCCTTCAAACTGATCCCGCCGAGCTTTCTGGAGAGCGGCGGCACCCTGCAGTTCGCCGTGAAGTACTGCGTGGGGTGCCAGGAGTACTGGGACAACAATAACGGCATTAACTATAAGATTAATTTCAAGGTTGTGAAGTTTGATGCCAGTGGACATTTTCTGGGTTGGGAAGATGTAACAGGTGGAACTCTACAGGTGACGGAGCTCTTGAGGCGCTTTCCCGAGCCGGTGTTTTATGAGCTCTTTCTCCAGTACCAGGACAGTCAGGGGAAGGCAATGGTGTGGCCTGTCCCTGTCAGAACCCTCAATCAGCAAACAGACACCCCAGGGTTCTCCAGAGATCTGCGCCGGTTCTTTTTGGTTGATGGGCTGACGGGAAGATCTGGCAGCCTGACTGACCAGCCACAATACGTCACCTACCTCAGCAGTCTGGCACTGAGCATGAATGAAGCCACCATGAAAAGAGATACCACAATTGCCATGGGGGTGCTGGGGGCCCTGTCGGTGTTGCTGGCCATGCTGGAGACGAGCAGCTGGAGTCGCAGGGCGGGACAGCAGTACATTACCTTATCTaCCATTGTCAAGTTCATCGCCTTCCTGATTGGCAATCTGGGAAACACGTTCTTCTTGGGCCAGCGCACTACTGTTGATATCGCGCTGCCCTCTGCTGGCGGCACAGTGGAAATGGACTTTAAAATCTACCTCTACTTGGCATTTGCCTTTAAGGCTTTGCAGGTGATTCATGTTCTTGTGGTCCAGGTGACCATCTCCATCTTCTTCATTGACTGGGAGAAACCAAAGAATACTACAGGGGGTCGGAGTCAGGGCTCATCGGTCAGTGCGTGGAGGATGTTCTTTGTGGCCAACGAGTGGAATGAGATCCAGACGATGAGGAAACTGAACCCTTTGCTTCAGCTCTTTGCAGTCCTGCTCATTCTTCAGGTTATTGGGGTCGAGAACATTGCAGCCCGAGACCTGAATCTAGCCGTGCAGCCCGGAGTCGACAATTACCTTTCTCCCTGGAGCCCCATCCTCAGATACGGGATCACTGCATCGGTCTGGCTGGCAGTTGGCTTGGTtcaaGTGTCTGTGTTCATTCTCATGCATCGCTGTTATGGCTTCTACATCCATGGTCGCTCAGTGCATGGCCATGCTGATGTTGGCATCGATGCCATACGTGCAAATTTGAGGAAAGAGGAGGTCCATAAAGACATGGATTACATAGTGAAGGACAAACTGTTGCTCGAGAGGGTGATGAACTATGAATTTCAGCAGCCTATTGAGAGGAGCATATTTTACAATGatcacGATGGCACTGTCTTCAGTGAAGTCCTGTACTACAGTAAAGAGATGACTCTCCTGCTCTTTGACACACTGCTTTTCTGTATTATCAACCTGGGGACCCAGAACTTAGTATTGGCTGCAATCCTCACATATGTTATACAACAGAGGATGAAACACAACTGA

Function

GO: NA

KEGG:

id description
K07189 PPP1R3; protein phosphatase 1 regulatory subunit 3A/B/C/D/E

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020701 True 2202 mRNA 0.54 15 30761959 30803517

Neighbor

gene id symbol gene type direction distance location
AMCG00020696 NA coding upstream 5640 30747838 ~ 30756319 (+)
AMCG00020698 NA coding upstream 15372 30740123 ~ 30746587 (+)
AMCG00020691 LOC101173775,LOC107669552,LOC107084340,LOC107728098,LOC107663990,LOC107565340 coding upstream 775916 29985078 ~ 29986043 (+)
AMCG00020690 LOC106561240,LOC105895589 coding upstream 911404 29641654 ~ 29850555 (+)
AMCG00020689 NA coding upstream 1184264 29575351 ~ 29577695 (+)
AMCG00020703 NA coding downstream 32055 30835572 ~ 30838031 (+)
AMCG00020704 NA coding downstream 305507 31109024 ~ 31131389 (+)
AMCG00020707 LOC106951238 coding downstream 348884 31152401 ~ 31155839 (+)
AMCG00020709 NA coding downstream 423605 31227122 ~ 31233624 (+)
AMCG00020710 foxf1 coding downstream 610008 31413525 ~ 31419355 (+)
G65067 NA non-coding upstream 59802 30700454 ~ 30702157 (+)
G65063 NA non-coding upstream 112595 30648824 ~ 30649364 (+)
G65024 NA non-coding upstream 773831 29986565 ~ 29988128 (+)
G64957 LOC103376870 non-coding upstream 1422676 29259554 ~ 29339283 (+)
G64916 NA non-coding upstream 1712144 29049493 ~ 29049815 (+)
G65163 NA non-coding downstream 342570 31146087 ~ 31149761 (+)
G65223 NA non-coding downstream 682066 31485583 ~ 31485902 (+)
G65246 tubb3,LOC107552791,LOC108431516,LOC108272015 non-coding downstream 761316 31564833 ~ 31566359 (+)
G65266 NA non-coding downstream 832246 31635763 ~ 31636329 (+)
G65270 NA non-coding downstream 854209 31657726 ~ 31659455 (+)
AMCG00020695 cdyl2,LOC106562298 other upstream 61705 30686706 ~ 30700254 (+)
AMCG00020697 dynlrb2,LOC106573385,LOC103025073 other upstream 225395 30533193 ~ 30536564 (+)
AMCG00020684 NA other upstream 1186613 29504227 ~ 29575346 (+)
G64979 NA other upstream 1296247 29464564 ~ 29465712 (+)
G64908 NA other upstream 1752358 29008663 ~ 29009601 (+)
AMCG00020708 LOC106562285 other downstream 359084 31162601 ~ 31217840 (+)
AMCG00020715 gas8 other downstream 655985 31459502 ~ 31484470 (+)
G65343 NA other downstream 1059866 31863383 ~ 31864706 (+)
AMCG00020742 NA other downstream 1290507 32094024 ~ 32095186 (+)
G65433 LOC106580491,LOC108439670,LOC103398109 other downstream 1383097 32186614 ~ 32189381 (+)

Expression


Co-expression Network