AMCG00020704


Basic Information

Item Value
gene id AMCG00020704
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31109024 ~ 31131389 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020704
GGTCTTCGATTAGCAACGAGTCATCCCCCGTCTCTTCCCCAGCGACCAATCACAGCTCTCCGGTTAGCACCCCCAAACGGGGCCCCATGGGTCCCATCATAGTGCCGCCGGGGGGCCACAGCGTGCCAAGCACCCCCCCTGTGGTCACCATCGCCCCCACCAAGACCGTCAATGGGATGTGGCGGAGTGAGGGTCGGCAGGCAGAGTCTGGGCCACGTGGAAGCAGTCGGGATCGTCTGGGTGGTGAGTCGGCCCAGGAGAAAGGCGGCCCCTCCGTCCCCCCACACCTCATCGGTAACCCCTACACCTTCAGCCTCGCCCCCGGCTCTGTGGTGCACCACGTGGTCCCTCCAGCCAGCGTCCCCGAGGACTACCTGCGCAGCTTCAGACCCTATCCCACCGCCGAGGACCTGCGGATGCCATCGCTGCCGCCCCTGGGCCTGGACCCAACTACAGCCGCAGCCTACTACCACTCCACCTACCTTCCCCACCCTTCCTTCTCTGCTTACAGAATGGACGACTCTTTCTGCTTGTCCCCCATGAGGTCTCCCTTCTACCCCCTGGGAACGGCGGGCACCCTGCCCTCTCTGCACCACTCGGCCGTTCACATGCACCTGCCCGGGGTGAGGTACCCAGCTGAGCTGTCGCACTCCTCGATCTCCGCACTGCAGTCCGAGCGCCTTTCCGAGAGGCTGCAAATGGAAGATGAACTGAGGCAACgagagcgggagagggagagggagagagagagggagcgtgagaaggagagggagcGGGAGGCTGAGCGGGAGAAGGAACgggagcgggagagggagcGTGAACGTGAGCGCGAGAGGGAGCTGGAGCGCGAgcgggagaaggagagagagcgggagcGGGAGGCggagagacagaaggagagagcaagagagaaggAGCTGCAGGCCTCCAAAGCCATGGAGAACCACTACCTGGCAGACCTACACGCCCTCAGGGCCCAGCCAGCTGAGGACCGGGCCAAAGCCGGGGAGAGACTGACCCCCAACAGGCCGGaaaaaaccAAAGAGCCAGCTCTCCCCGCACCCAAGCCAGTCCCACCAGGTCTGCTCCCCTCCCCTGCGTCCTCGACCCACCTCGCCGTGCCCGGCCTCATCCCTACCCATGGATCTTTCTTGGGGCCGGCTGGCACGGCTGGGCTGGGGGTCGGGGTGGGCAGCTCTGCCCAGGGGACCCTGGCAGCGGCATTGCTCCTGCAGCGCAACAACGAGGAGGAGAAATGGTTGGCGCGGCAGAGGAAGCTGCGGCAGGAGAAGGAGGACCGGCAATTCCAGGTGTCTGAGTTCAGACAGCAGGTCCTGGAGCAGCACCTGGACATCGGCCGGCCCGGGGAGGGAGACCTCCGGGGGGAGGGCCACAGGCCCATCCCAAACCACCACGAGCCGGGGGGCAGAGATTTGCTTCCACACTTGGGGGGGCCACCACCCCTGATCTCCCCCAAATCTCAGCACCGCGAACAcggccccccaccccccaccaccctgtgGAACCCAGCCTCGCTCATTGACACGGTCTCCGAGCGGCGCAGCCATGAGCCGTCCCTGCCCTCCAGCCACTACGAGGCCAGCCGGCAGGTCCAGGCATTGGGCAAGGGCGAGCGCCACTACGGCTCCGAGAAGCTGGAGGAGAGCGGCAAGAGGAAAGAGTCTCTGGAGAAGTACCCCTCCCTCAGAGGAACCAGCTTCCTGGAGCCCAGCACGTTCCTGGCCGAGCTGGAGAAATCCACACAGTCCTTTCTCAACCAGCAGAGGGCATCCTTGTCCCTGCCCAGCCAGTATGGGGACCTGAGTGCCCCCCACAAGGCCAGCTCCCCCTACAGAAGTATGCATGCACCCCCCCGGGGGCCGGACCCAATGCTGGTGTACGACGACTTCCTGCAGCAGCACAGGCGGCTGGTCAGCAAGCTGGACCTGGAGGAGAGGAGGCGGCGAGAGGCCCGGGAGAAAGGCTATTACTACGATCTGGACGACTCGTACGACGAGAGCGACGAGGAGGAGGTGCGAGCCCACCTGCGCCGCGTCGCCGAGCAACCGCCACTCAAGCTGGACGACTCGTCGGAGAAGACGGACTTCCTGCGTGTGTTCGGGTTGACCACTCGGGCCCGCCGCGACGAACTGCTGCtgcagaagaggaggaagaggcgGAGGATGCTGAGGGAACGCAGCCCCTCTCCACCGGCCGTCCAGAGCAAACGACAgaccccaccaccacctcccctCAGCACCCGCTACACCGCCGAGCAGATGAACTGCACCCCCGAGTTAGAGGACAAGAAGAAGTTCCTCACCATGTTCAGCCTGTCCCACGtggtggagctgctgcaggcTATCAAGCAGAAGAGTGTGACCCTGGAAAACATCAGACACCCCCTTCAGCCCCTGTGCAAGAGTCCTGCTGCCCCCCACACAACAGACACGACTGCAGGCCACCCTCCCGCTGACTCGGAACGGCCGCCAAGCGTCCGGCCGCCAACCCCCTGCCCTCCCGACTCACAGAAGGTTGTGGAGTCCAGCCGGCCGGAGCAGCTAAAGCCCTCAGAAGCACTGAGACCAAAAGATGACCCCCGGGCTCCCTTCCATAGTGGGGACAAGGCCAGGCTAGGCGAGGGCCATTTGGCCAAGAAGAACCCCAGCTTACTCAACAGCATGCGGCCCCCACAGCCCCCCAAGGATGGCCCCCACAGCCTGAATGGAAAGACCAAACCCTGGGAGAGTTTCACTCCGGAAGAGTTTGCCCAGCAGTTTCATGAGTCAGTGCTGCAGTCTACCCAGAAGGcactacagaaacacaaagggtGTGCGACAGGGATAACAGAGACGAACCACAAGCTGGACTCGTCGGTGCACTACAACATTCCAGAGCTGCAGGGCCAGTCCCGGCTGGCCGTCCCCCAGCCCAACGGACAGCACTGCCCCCTGCCGCCCCGTCGAGACGTCCAGGCCATGCGGGAGGAGGCCTCGGGGAACGAGGACGAGGAGGACGAAGACTCGGAGGAGGAATACGAGGAGGAGGCTCCGGCTCCAAGTATTGAGCGGCAGGTGCTACAGAGCCAGTGCCGGAGGCTGGAGGCCCATCACTATAATCTGACTGTGACTGCGGAACAGCTCTCACACAGCATGGGGGAGCTGGTGGCCCAGAAACAGAAGCTGGCATCCGAGCGAGAGAAGCTGCAGGCGGAGCTGGACCACTTACGAAAGTGCCTTGCGTTTCCACAGATGCACTGGTCTAGGGGTTACTTCAAGGGCTACCCCCCGAGGTGACATCCCTACTCCCCAGCTCCCGACCTCCCCCGGCCCCCACAGTAGCAAAAGAGAGTCTATTTTATTACTTGGATTATTTAAAAGACTTGTCTCCACAAAGAAGGATGGAAGCTCCAGTAAGCCACGAATGTGCCATGCGTTAGAAAGCCTAATCCGCCGCGTCTGATGTCAGTAGTGCAGGAGGGGCAGGCCGTCGAGCCCCTGGCTGTGGGGGTGGCCTTTTTGTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020704 True 3526 mRNA 0.63 14 31109024 31131389

Neighbor

gene id symbol gene type direction distance location
AMCG00020703 NA coding upstream 270993 30835572 ~ 30838031 (+)
AMCG00020701 NA coding upstream 305507 30761959 ~ 30803517 (+)
AMCG00020696 NA coding upstream 352705 30747838 ~ 30756319 (+)
AMCG00020698 NA coding upstream 362437 30740123 ~ 30746587 (+)
AMCG00020691 LOC101173775,LOC107669552,LOC107084340,LOC107728098,LOC107663990,LOC107565340 coding upstream 1122981 29985078 ~ 29986043 (+)
AMCG00020707 LOC106951238 coding downstream 21012 31152401 ~ 31155839 (+)
AMCG00020709 NA coding downstream 95733 31227122 ~ 31233624 (+)
AMCG00020710 foxf1 coding downstream 282136 31413525 ~ 31419355 (+)
AMCG00020714 NA coding downstream 364655 31496044 ~ 31503954 (+)
AMCG00020722 NA coding downstream 553740 31685129 ~ 31709788 (+)
G65067 NA non-coding upstream 406867 30700454 ~ 30702157 (+)
G65063 NA non-coding upstream 459660 30648824 ~ 30649364 (+)
G65024 NA non-coding upstream 1120896 29986565 ~ 29988128 (+)
G64957 LOC103376870 non-coding upstream 1769741 29259554 ~ 29339283 (+)
G64916 NA non-coding upstream 2059209 29049493 ~ 29049815 (+)
G65163 NA non-coding downstream 14698 31146087 ~ 31149761 (+)
G65223 NA non-coding downstream 354194 31485583 ~ 31485902 (+)
G65246 tubb3,LOC107552791,LOC108431516,LOC108272015 non-coding downstream 433444 31564833 ~ 31566359 (+)
G65266 NA non-coding downstream 504374 31635763 ~ 31636329 (+)
G65270 NA non-coding downstream 526337 31657726 ~ 31659455 (+)
G65100 NA other upstream 338097 30767024 ~ 30770927 (+)
AMCG00020695 cdyl2,LOC106562298 other upstream 408770 30686706 ~ 30700254 (+)
AMCG00020697 dynlrb2,LOC106573385,LOC103025073 other upstream 572460 30533193 ~ 30536564 (+)
AMCG00020684 NA other upstream 1533678 29504227 ~ 29575346 (+)
G64979 NA other upstream 1643312 29464564 ~ 29465712 (+)
AMCG00020708 LOC106562285 other downstream 31212 31162601 ~ 31217840 (+)
AMCG00020715 gas8 other downstream 328113 31459502 ~ 31484470 (+)
G65343 NA other downstream 731994 31863383 ~ 31864706 (+)
AMCG00020742 NA other downstream 962635 32094024 ~ 32095186 (+)
G65433 LOC106580491,LOC108439670,LOC103398109 other downstream 1055225 32186614 ~ 32189381 (+)

Expression


Co-expression Network