Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020707 |
| gene name | LOC106951238 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 31152401 ~ 31155839 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:1902600 | proton transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| id | description |
|---|---|
| K02263 | COX4; cytochrome c oxidase subunit 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020707 | True | 1016 | mRNA | 0.42 | 5 | 31152401 | 31155839 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020704 | NA | coding | upstream | 21012 | 31109024 ~ 31131389 (+) |
| AMCG00020703 | NA | coding | upstream | 314370 | 30835572 ~ 30838031 (+) |
| AMCG00020701 | NA | coding | upstream | 348884 | 30761959 ~ 30803517 (+) |
| AMCG00020696 | NA | coding | upstream | 396082 | 30747838 ~ 30756319 (+) |
| AMCG00020698 | NA | coding | upstream | 405814 | 30740123 ~ 30746587 (+) |
| AMCG00020709 | NA | coding | downstream | 71283 | 31227122 ~ 31233624 (+) |
| AMCG00020710 | foxf1 | coding | downstream | 257686 | 31413525 ~ 31419355 (+) |
| AMCG00020714 | NA | coding | downstream | 340205 | 31496044 ~ 31503954 (+) |
| AMCG00020722 | NA | coding | downstream | 529290 | 31685129 ~ 31709788 (+) |
| AMCG00020723 | NA | coding | downstream | 558057 | 31713896 ~ 31720373 (+) |
| G65163 | NA | non-coding | upstream | 2640 | 31146087 ~ 31149761 (+) |
| G65067 | NA | non-coding | upstream | 450244 | 30700454 ~ 30702157 (+) |
| G65063 | NA | non-coding | upstream | 503037 | 30648824 ~ 30649364 (+) |
| G65024 | NA | non-coding | upstream | 1164273 | 29986565 ~ 29988128 (+) |
| G64957 | LOC103376870 | non-coding | upstream | 1813118 | 29259554 ~ 29339283 (+) |
| G65223 | NA | non-coding | downstream | 329744 | 31485583 ~ 31485902 (+) |
| G65246 | tubb3,LOC107552791,LOC108431516,LOC108272015 | non-coding | downstream | 408994 | 31564833 ~ 31566359 (+) |
| G65266 | NA | non-coding | downstream | 479924 | 31635763 ~ 31636329 (+) |
| G65270 | NA | non-coding | downstream | 501887 | 31657726 ~ 31659455 (+) |
| G65276 | NA | non-coding | downstream | 526275 | 31682114 ~ 31683154 (+) |
| G65100 | NA | other | upstream | 381474 | 30767024 ~ 30770927 (+) |
| AMCG00020695 | cdyl2,LOC106562298 | other | upstream | 452147 | 30686706 ~ 30700254 (+) |
| AMCG00020697 | dynlrb2,LOC106573385,LOC103025073 | other | upstream | 615837 | 30533193 ~ 30536564 (+) |
| AMCG00020684 | NA | other | upstream | 1577055 | 29504227 ~ 29575346 (+) |
| G64979 | NA | other | upstream | 1686689 | 29464564 ~ 29465712 (+) |
| AMCG00020708 | LOC106562285 | other | downstream | 6762 | 31162601 ~ 31217840 (+) |
| AMCG00020715 | gas8 | other | downstream | 303663 | 31459502 ~ 31484470 (+) |
| G65343 | NA | other | downstream | 707544 | 31863383 ~ 31864706 (+) |
| AMCG00020742 | NA | other | downstream | 938185 | 32094024 ~ 32095186 (+) |
| G65433 | LOC106580491,LOC108439670,LOC103398109 | other | downstream | 1030775 | 32186614 ~ 32189381 (+) |
