AMCG00020712


Basic Information

Item Value
gene id AMCG00020712
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31435628 ~ 31448649 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020712
ATGCAGTTCTCTACAAAACCCAACATGGCAATGACTGAAAAAAGCCAGAAAGAAATAGTCTTACTACAAGCGTGTctagtgttaatgtgctgtaataTCCACATTGTGACAGGAACCGAAGACAGCCCCCCCGTCCTTGTTACAAAATATGGCCAGCTGATGGGAAAGAATGTCCGAGTTAAAGAAACAACACGTACGGTCTCCGCTTACCTGGGGATTCCCTTCGCAGAGCCACCCCTGAACCAGCTGAGGTTTGCTCCTCCACAGCCACCAAAAGCCTGGACGGGACTGAGAGATGCCACAGTGTACCCCCCCCTGTGCCTACAGGATCTGGACCATGCAAAGAAGCTTTCCGATTTATATGGGGGAAAGTTCCCTCCTCTCAAGAGCTCTGAAGACTGCCTGTACCTCAACATCTACAGCCCAGTGAAGCCGGGAGACTCAGCGAGACTACCGTACCGTCTGGGCATTCTGGGATTTTTAAGCACTGGAAGCGGCATCACTCCAGAGAATGTGGGCATGTTGGACCAGGTGTTTGCTCTGCAGTGGATCCAGGAGAACATTGCCAGCTTTGGGGGTGACCCAGAGGCAGTTACTATCTTCGGGGAGTCTGCTGGCGGCATGAGCGTCTTTTTTCACATGTTGTCCCCCAAATCCTCTGGTCTCTTCCATAGAGCGATCTGTCAGAGTGGAGTGGGTCTGTTCCCTATGTTTTGGCTGAGAAACCCCAAGCCAGCAGCTCAGGGGGAACTGCTGCTGATGCCTAGCTTGGATGGAGAGTTTATTCCCAAAAACCCAGAGGAGCTTCTGCAGGAAATGGCTTTCAATAATGTTCCATATATAATAGGAATGAACAACCATGAATTTGGCTGGATGCTGCCTCATTTTATGTTCCCTCCCAGATGGGACAGTGGAATGACCCGAGAGACCACGTCAATGATATTGTCatccattttaaagaaagcGGATCTACCTACATTTGCATTGGAAATCATTAATGATGAGTATTTTGGGGACATGGAGGACCCTATCGAAATCAGGCAGACATTTGTGGAGCTATTGAGCGATATGCTTCTGGGGTTTCCAGCTATCAAAACGACAAGATATCACAGTGATGCTGGGTTCCCAGTTTACTTCTACGAGTTCCAGCACCGTCCCAGTGTCTACAGGGAGAGCAGACCTGAGTTTGTGAAAGCTGATCATTTCGATGAGGTTGGCTTTGTGTTTGGTGCCCCCTTCTGGACTGAagacatacaaatattaaAAACCCCAATGGTGATGGTCTGCTTGACTGGCCCACATATACCTCGACTGAAGAGTATATGCAGTTCAATCTAAACTTGACCCTTAACAGCACACTGAAAAAGCACCGATTGAGATTTTGGACTGAAGTTTTCCCTAAAAAAATAGAGGCAGGGATGAATTTGTATGAGCATGCTGAGCTCTAACATTAGTTCTGTTtatttcaaaaatgcatacatttgcttttacatgtattttaggTTTCCTTGGGAGCTAAATGTTATCTATGTCTTTGTTTCCAATTATTTGTAAATCACTGCTTTTATCAAAACACCAGCTAAATTGAtcagaattaaatgtttccaagtttttatatattataatgtggTGCTCTATACTATCAGATTGACTAGAGTTGGAGATATCTGCTCAAGGTGGCTGATTAATGGTagcttcccactgaggtcaggacagcagagtccctgacaaCTTTCTGGTAATTtatcaagacacatctgttcagactgtacttttaatataaatatatacatatatataaattattctcCTGAGCTCTTCAGTGGTCCTGTAATTTTGCCTTTTATATAATTAT

Function

GO: NA

KEGG:

id description
K01044 CES1; carboxylesterase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020712 True 1855 mRNA 0.44 11 31435628 31448649

Neighbor

gene id symbol gene type direction distance location
AMCG00020711 NA coding downstream 2675 31426521 ~ 31432953 (-)
AMCG00020705 NA coding downstream 283656 31146087 ~ 31151972 (-)
AMCG00020706 NA coding downstream 292225 31139693 ~ 31143403 (-)
AMCG00020699 NA coding downstream 675545 30758126 ~ 30760083 (-)
AMCG00020693 NA coding downstream 1014994 30365020 ~ 30420634 (-)
AMCG00020717 LOC108428436,LOC106927143,LOC105895635,LOC103149374 coding upstream 70576 31519225 ~ 31543659 (-)
AMCG00020716 NA coding upstream 95919 31544568 ~ 31545686 (-)
AMCG00020719 def8 coding upstream 97724 31546373 ~ 31560989 (-)
AMCG00020718 tubb3,LOC108431516,LOC107552791,LOC108272015 coding upstream 116184 31564833 ~ 31573696 (-)
AMCG00020721 NA coding upstream 145579 31594228 ~ 31594905 (-)
G65179 NA non-coding downstream 215884 31219543 ~ 31219744 (-)
G65178 NA non-coding downstream 217743 31212938 ~ 31217885 (-)
G65166 NA non-coding downstream 279363 31152419 ~ 31156265 (-)
G65109 NA non-coding downstream 605086 30830181 ~ 30830542 (-)
G65073 NA non-coding downstream 733455 30700486 ~ 30702173 (-)
G65221 gas8,LOC108276428 non-coding upstream 32107 31480756 ~ 31481969 (-)
G65267 NA non-coding upstream 199975 31648624 ~ 31648851 (-)
G65297 NA non-coding upstream 262885 31711534 ~ 31711764 (-)
G65314 NA non-coding upstream 307613 31756262 ~ 31756689 (-)
G65315 NA non-coding upstream 308802 31757451 ~ 31758500 (-)
AMCG00020713 NA other downstream 22805 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 626782 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 697652 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 904492 30449745 ~ 30531136 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other downstream 1902511 29520191 ~ 29533117 (-)
AMCG00020746 NA other upstream 673236 32121885 ~ 32122933 (-)
G65549 NA other upstream 909589 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 1106211 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 1159213 32607862 ~ 32610708 (-)
G65641 NA other upstream 1206485 32655134 ~ 32657019 (-)

Expression


Co-expression Network