AMCG00020716


Basic Information

Item Value
gene id AMCG00020716
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31544568 ~ 31545686 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020716
ATTGAATCAGGCAAATGATGGGTGAGCCACCACACTTACCCCGTACCTACACTGTGACATTGAGTGTGTTTCGCGTTGCTTGTGAACGGTCTCTGGGAAGACAGGAGCGACGTGACAAGCGGAGCAGCACCGGGAGAATGGCTCACATGCTGGGTCTCCTCTCGGCGGCTGCGGGGCCCCTGGGGCTCGGACTGCGGAGCTGGGGGTCCAGCCGAGCGGTACTCACATCTGGGGTACTGTCCGCGCTGGGCTTCCGCAACACCGGTGTCAGGAGCTTTGTGCTACACAGAATAAAGCAGGGTGTATCTGGGGAACAAGCATCATTGACCCAGCTGCTCTGTTCTAAGCCGCCGAAAGgtTTTGAAAAATACTTTCAGAAGAATGGAAAAGCATCTGAACCAAAGACAGCAGCTGGAGAATCAAAAGGTAatattaaggaa

Function

GO: NA

KEGG:

id description
ko03050 Proteasome
ko05169 Epstein-Barr virus infection

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020716 True 440 mRNA 0.54 3 31544568 31545686

Neighbor

gene id symbol gene type direction distance location
AMCG00020717 LOC108428436,LOC106927143,LOC105895635,LOC103149374 coding downstream 909 31519225 ~ 31543659 (-)
AMCG00020712 NA coding downstream 95919 31435628 ~ 31448649 (-)
AMCG00020711 NA coding downstream 111615 31426521 ~ 31432953 (-)
AMCG00020705 NA coding downstream 392596 31146087 ~ 31151972 (-)
AMCG00020706 NA coding downstream 401165 31139693 ~ 31143403 (-)
AMCG00020719 def8 coding upstream 687 31546373 ~ 31560989 (-)
AMCG00020718 tubb3,LOC108431516,LOC107552791,LOC108272015 coding upstream 19147 31564833 ~ 31573696 (-)
AMCG00020721 NA coding upstream 48542 31594228 ~ 31594905 (-)
AMCG00020720 tcf25,LOC106562269,LOC106562272 coding upstream 60602 31606288 ~ 31632057 (-)
AMCG00020726 NA coding upstream 116951 31662637 ~ 31670494 (-)
G65221 gas8,LOC108276428 non-coding downstream 62599 31480756 ~ 31481969 (-)
G65179 NA non-coding downstream 324824 31219543 ~ 31219744 (-)
G65178 NA non-coding downstream 326683 31212938 ~ 31217885 (-)
G65166 NA non-coding downstream 388303 31152419 ~ 31156265 (-)
G65109 NA non-coding downstream 714026 30830181 ~ 30830542 (-)
G65267 NA non-coding upstream 102938 31648624 ~ 31648851 (-)
G65297 NA non-coding upstream 165848 31711534 ~ 31711764 (-)
G65314 NA non-coding upstream 210576 31756262 ~ 31756689 (-)
G65315 NA non-coding upstream 211765 31757451 ~ 31758500 (-)
G65337 NA non-coding upstream 239829 31785515 ~ 31803792 (-)
AMCG00020713 NA other downstream 131745 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 735722 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 806592 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1013432 30449745 ~ 30531136 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other downstream 2011451 29520191 ~ 29533117 (-)
AMCG00020746 NA other upstream 576199 32121885 ~ 32122933 (-)
G65549 NA other upstream 812552 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 1009174 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 1062176 32607862 ~ 32610708 (-)
G65641 NA other upstream 1109448 32655134 ~ 32657019 (-)

Expression


Co-expression Network