AMCG00020726


Basic Information

Item Value
gene id AMCG00020726
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31662637 ~ 31670494 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020726
ATGTTTTTATTCTACTCTCCAGGGGGGAAGAGGGATGAGGATTTAATCTTGCCCATAAATTCCTCTTTGAGTGTCACACTTCACCAAGACCAGCTGAAGACCACTACCACAGTCGCCTCCAGTCGTCACTTTAAAGAAGATCGCATCTGGCTCAATGGCAAAGAGGACAACATCAACCAGCCGCGACTGCAGTCCTGTTTGAGAGAAATGTACACATTGGCCCGGCTGTACGGGGTGGAGGGCGAGCTGTCGGAAGTGGCGCGGCAGGGCTCGGGCAGTGCGTGCCGCAGTATGTATGGGGGCTTTGTGCAGTGGCGCATGGGAGAGCGGACTGATGGGAAGGACAGCGTGGCGGAGCAGGTGGAGGCTGAATCTCACTGGCCGGAGCTACGCGTGTTAATTCTGGTGGTGAGTGCGGAGCGTAAACCAGTCGGAAGTACGGCAGGTATGCATACGAGCGTGGAGACCAGCCTACTTCTAAAGCACCGGGCCGACTCTGTGGTTCCTGGAAGGATGACTGAGATGATAAGTGCCATCCGCCAGCGGGACTTCGCCGCGTTTGGAGAGCTGACCATGAAGGACAGCAACCAGTTCCATGCCACCTGCCTGGACACCTACCCCCCCATCTTCTACCTGAATGACGTGTCTCATCGCATCATCAGGATGGTGCACTGCTACAACGCGCACTATGGACACACCCGGGTAGCATACACATTTGATGCCGGCCCCAATGCTGTGATCTACACACTGGAGGAGCACGTGGATGAGTTTGTGCAGGTGGTCAAGCACTTCTTCCCCCCGGAAAACAATGGAGGACAGTTCCTCAAGGGTCTGTCTGTGAGCCCAGTGTCTCTGTCTGAGGAGGTGAAAACTGCCATTGCAGTGGAGCCCACTCCCAAAGGAATCAGCTACATCATCAACACAAAGGCAGGCCCAGGTCCTTGCATGGTGGAAGAGCCCAGCCTCCATCTTTTGGGAGCAGATGGATTACCCAAGCAAACGGTTTGATCATAGACCATCAACAAAGAATACCCAGCAGCTCTGGGCCAGTAGGAAGCACAGAATACGTCAAACAAAGTATCAGGAAATTAATTATAGCCATGATGGTTGATAAACAGTTACCCCAGTATTCTCCAgctccccccctccacacacacaatcggacaattcatgtatattttatgagatatttgaatacaataatttgtggcaggcactgtcctaaACTATTATACCATTTGTAATGTGGAGTTTAAAAAATTGTGTTTGTAGAGGAATTGAGGAGACTGCTTGAATctgcaattatatttataatttatcatCAGTGTGTCACATCAGCTGTCGGTTAAAATGGAGTAGAAATGGATGGAATGCAAATCGAGAGATTGTGACCAGACTTTGGATTTGCACATCTGTTGGCTCCGAAAAGCATTCTATACACAAAGTGGAAGACTTTCAAAACTATGGGCTCTATTGCAGATGTTCCTACACTTTTCTGTTTCCAACTGATTTTCTGAAACTATTTatagaataaatgttttaatttactatactgtatactatactatactggcATCTGTAAAGTAATTTTCCAGAGAATGCTGAGGTATACACCTTTAATATGACCATCTTTGTATgttgaagtatttatttgagGTGCTACATGTTTTCTGTAGGCAGGACATCTGTATAGTGTAGAAGACATGTAAATAACTTTGCTGTGCCTTGCCTGCTAATTGCCTCTGAAATAAAAAGTTTTGTAATTTCA

Function

GO: NA

KEGG:

id description
K01597 MVD, mvaD; diphosphomevalonate decarboxylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020726 True 1768 mRNA 0.47 8 31662637 31670494

Neighbor

gene id symbol gene type direction distance location
AMCG00020720 tcf25,LOC106562269,LOC106562272 coding downstream 30580 31606288 ~ 31632057 (-)
AMCG00020721 NA coding downstream 67732 31594228 ~ 31594905 (-)
AMCG00020718 tubb3,LOC108431516,LOC107552791,LOC108272015 coding downstream 88941 31564833 ~ 31573696 (-)
AMCG00020719 def8 coding downstream 101648 31546373 ~ 31560989 (-)
AMCG00020716 NA coding downstream 116951 31544568 ~ 31545686 (-)
AMCG00020725 nip7 coding upstream 52687 31723181 ~ 31725760 (-)
AMCG00020727 nob1 coding upstream 60763 31731257 ~ 31734972 (-)
AMCG00020735 NA coding upstream 226832 31897326 ~ 31914451 (-)
AMCG00020739 NA coding upstream 353828 32024322 ~ 32038155 (-)
AMCG00020745 NA coding upstream 400707 32071201 ~ 32083067 (-)
G65267 NA non-coding downstream 13786 31648624 ~ 31648851 (-)
G65221 gas8,LOC108276428 non-coding downstream 180668 31480756 ~ 31481969 (-)
G65179 NA non-coding downstream 442893 31219543 ~ 31219744 (-)
G65178 NA non-coding downstream 444752 31212938 ~ 31217885 (-)
G65166 NA non-coding downstream 506372 31152419 ~ 31156265 (-)
G65297 NA non-coding upstream 41040 31711534 ~ 31711764 (-)
G65314 NA non-coding upstream 85768 31756262 ~ 31756689 (-)
G65315 NA non-coding upstream 86957 31757451 ~ 31758500 (-)
G65337 NA non-coding upstream 115021 31785515 ~ 31803792 (-)
G65397 NA non-coding upstream 387824 32058318 ~ 32061297 (-)
AMCG00020713 NA other downstream 249814 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 853791 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 924661 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1131501 30449745 ~ 30531136 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other downstream 2129520 29520191 ~ 29533117 (-)
AMCG00020746 NA other upstream 451391 32121885 ~ 32122933 (-)
G65549 NA other upstream 687744 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 884366 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 937368 32607862 ~ 32610708 (-)
G65641 NA other upstream 984640 32655134 ~ 32657019 (-)

Expression


Co-expression Network