AMCG00020735


Basic Information

Item Value
gene id AMCG00020735
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31897326 ~ 31914451 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020735
ACTTACTGTAGCTGAGAGGTTTAGTAATATATCATACCATTCCCATgtataataaagtaaaacataattttaaaaacacttaaaaaggaaattatttaaagatcaaCAGagcttttttggtttttatgcAACCACAGGAGAAACACTGTTCAACGAGtggtgggttttgtttttcctctttaacTTAAAAATACCACAACGGGGCGGCTTTTATGAGGAGAGAAATTTTGCGTGTGCTTTCCAAAAGAGGGGGGAAACAGCAGGAAAAAACAGCCACTGTGTAGCTCAACAGCCGTGCAAGATGCTGACGTTATTTTAGTCCCGATCAAGCTTTGGCTATGTGAAGGTAATAGACGTAGTCTGTTCAGCCAacaagactttttttaatgttaaagtgAAACCTATATCATTGGGATAGCAGCAAGAGGAGAAATCAGTTCAATTGAGTGAGATAGTTGGCTGTTGAAGACATCAGCAGAAGCCCGTCCGTGGATTCCTGTCAAGATGTTCTGGAGACAGGTTGTCATGGtgagcctctctctctgtctgatgCACATCTCTTCTCAGCAGGACTGCCCGAGCCAGCAGGACTTGTCAACCTCTTTAAGGCACGTCCAAAAGCTGCTGTCTGCTCAGGAGGCCTCCTATCTGCAGAGCCTGCGCACCCTGAGGAAAAAGCTCAATCACCTCCAGAGCACCATCCTCAGGCAGGCCAGCAAGGCCAACGCGACCTGCCCCAAGCTAGAGCCGCCTAGCCACGGCAGGAAACTGGGAAAGCTGACAGCCGTGGGCCATGAAGTGCACTTCCTGTGTGAGCTGGGGTTCGATCTGGTGGGCTCAGAGAGCAGAGTGTGTCAGGACTCCCTGAGCTGGAGTGGCCAGCAGCCCACCTGCAAGAATATAAACGAATGTGCACAGATGCCCTGTCTGAACGGAGGGACTTGTGTGGATGAAGTGAACCATTATGTCTGCATGTGTCCCAAAAGTTGGACTGGTCCCAACTGCCAGAATCCGGTACACACCTCAGATTGGAGCACGCTGACgaactcctcctcctcctccccacaTGTCCGGCCGTCTCGGTGCACACAGCTCCAGGGCTCCACACACTGCACCTGTGAGGCGGGATTCACCATCGCTGGCCGGGACAACAGCCTTTGCAGGGacatTGATGAGTGTGAGCTTTTCCACACGGGGAGGAGGGGGCGCCTGTGTGCGCACGCCTGTGGCAATACGCCTGGCTCCTACCGCTGCACCTGCCCCCCCGGCTACAACCTCACCCCTGACCAGCGCAACTGCAAAGATGTGGACGAGTGCACCACCCGTCAGCACAACTGCAGCCAGGAGGCCGTGTGTGTGAACACCCACGGGGGCTTCCAGTGCGTGCAACCCGAGTGCCCCCGCTCCCGCAATGCCACCTATGTCAAGACCTCCCCGCTgcgGTGTGAGCGCAACCCCTGCCCTGTGGACAACAAGGCCTGTGCCCAGGCTCCCTCCTCAGTCTCCTTCAGCTACCTCTCCCTGGTGTCGAACCTGACCACACCACGTGTGCTGTTCCGGCTGTCTGCGGCGCGGGTGCTGGGGGACAGTCTGAGGTTTGGGCTGCTGGGAGGGCGTGGACGGCGCCATTTCACCGTGCAGCGCTCTGACCGCCTCACCGGGCAGCTGCTCCTGGTTAGCCCAGTGCAGGGCCCTGCCACGCTGGAGGCCGAGATGGAGATGAGCGAGCTGGAGAGGAGGGCCGTGCTTGGCCGCTACGTCACCAAGGTGACCCTCTTCGTCTCGCAGTATGACTTCTAGACCCAGACAGACTCACGTGGCATGCACTCATCGCAACACCATAAGAGCTATAGTGTCCCTTTCTGCTCACAAGAATATTAACCcattatttaaactttaaatttcTTCTACAGTTCTTCTACAGTTACAGATTGCAAATTGATATACATAACATATCTCAAGACTGTAGCATGAGACTAAAGACTGGTACCAACCACAGCACGACTGCAGCCGTAAGCATAATCTTTATCTCCCTGGTCTCTGGCTACTTCAAGAGTGTTTTATCTAGGATGTGGCCAATGACTGTCTTCATGCAGTGAATGTGGGGCTTGTTATACAAGTTATACTAGTGTGGCACTACTAATATATTGCCAAAATCATAACGATGAAATCTACAATGACAAACAACATGATGCACTCTAAATAAACCAAATTTAAAAGCTTGTAATCGagacaaaaacatatattaatctGTAATAAAACAGTCAACCGCAGCTCGGGACAACGTGGGGCTTTGACAATGTCCAGGTCTTCTAAGCTTGTTGCCAAACTGTTTTTATACGACttattttttagaattgtaATGGTTGTAGGTTTACCATTTGTATCGGCGACAATAACAAAGTTTACAGTTgatatgtattgtaatgttcTAGGAAGCATCAGTGTGCTTTTTATTTAGTAAAGCTTATTTTCTAGGGCTATTTCTTGAAGTCTTTGCATCATCTTCATTTGGAAGCGAGTGGCGTTGAACATATTGCAAATCACTAGTCCAGGTAATACATAATGCAGGCAGACTTAAAGAACATGCCTTTATACATTGAACAAAGTTCTGTAAGAGCAATTAAAAGTCCTTATACAATTTTTAGTAGCTGAAGATGAAATTGTAACCAGGTTGAGCAATTTGACTAGATTAGAGACTTTCACAGAGGGGTTTTCCAATTATTTGTGGTTGTGCGTCCTCCTGTAAATGTTCATGTTATCCAATTATAGCATTTGTACTTCTTTAAATATCAGTGTTTTATAGTGAAATGAGG

Function

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0052547 regulation of peptidase activity biological_process
GO:0051336 regulation of hydrolase activity biological_process
GO:0005540 hyaluronic acid binding molecular_function
GO:0031406 carboxylic acid binding molecular_function
GO:0043177 organic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020735 True 2816 mRNA 0.48 8 31897326 31914451

Neighbor

gene id symbol gene type direction distance location
AMCG00020727 nob1 coding downstream 162354 31731257 ~ 31734972 (-)
AMCG00020725 nip7 coding downstream 171566 31723181 ~ 31725760 (-)
AMCG00020726 NA coding downstream 226832 31662637 ~ 31670494 (-)
AMCG00020720 tcf25,LOC106562269,LOC106562272 coding downstream 265269 31606288 ~ 31632057 (-)
AMCG00020721 NA coding downstream 302421 31594228 ~ 31594905 (-)
AMCG00020739 NA coding upstream 109871 32024322 ~ 32038155 (-)
AMCG00020745 NA coding upstream 156750 32071201 ~ 32083067 (-)
AMCG00020744 wdr45,LOC102779567 coding upstream 190279 32104730 ~ 32109416 (-)
AMCG00020743 NA coding upstream 208940 32123391 ~ 32138907 (-)
AMCG00020751 kat6a,LOC103398109,LOC107697242 coding upstream 274099 32188550 ~ 32212493 (-)
G65337 NA non-coding downstream 93534 31785515 ~ 31803792 (-)
G65315 NA non-coding downstream 138826 31757451 ~ 31758500 (-)
G65314 NA non-coding downstream 140637 31756262 ~ 31756689 (-)
G65297 NA non-coding downstream 185562 31711534 ~ 31711764 (-)
G65267 NA non-coding downstream 248475 31648624 ~ 31648851 (-)
G65397 NA non-coding upstream 143867 32058318 ~ 32061297 (-)
G65465 NA non-coding upstream 272031 32186482 ~ 32187711 (-)
G65468 NA non-coding upstream 298276 32212727 ~ 32215757 (-)
G65571 NA non-coding upstream 600952 32515403 ~ 32515617 (-)
G65753 NA non-coding upstream 1359725 33274176 ~ 33274444 (-)
AMCG00020713 NA other downstream 484503 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1088480 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1159350 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1366190 30449745 ~ 30531136 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other downstream 2364209 29520191 ~ 29533117 (-)
AMCG00020746 NA other upstream 207434 32121885 ~ 32122933 (-)
G65549 NA other upstream 443787 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 640409 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 693411 32607862 ~ 32610708 (-)
G65641 NA other upstream 740683 32655134 ~ 32657019 (-)

Expression


Co-expression Network