AMCG00020743


Basic Information

Item Value
gene id AMCG00020743
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32123391 ~ 32138907 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020743
agagagagagagagagagagaggggggttgTTTTCCAGTAGCGGTGTGGTGGTGTTTTGCTGGGAACAATAGCTTTGGCTCAGCCCTGGTCTCGTattacagtgagagagagagaggggggagaaggagagaaagagagagagagagaagggggttCCGCTATGCAAACTGACAGCATCAGATGTTTTGATCTGCTGGATTGCTGAAAAAGAGGAAAGCAGGGAGAGCAGAGCTGTCTTTCGCGGAACAGAGAACGGAGTTGTGAGAGTTGTTTCGCCGGGACAGAGACCCCCGACCACTCGGACACAGAGACCCCTTGCGACCGGACAGCCTCCAGGGCAGGATCCGCAGCCCAGCCGACGCGCACCGGTTGCGCCAGCCAGCAGAGCTCGGACACGGTACACGGACCCGTGTCACTCGAGACCTTCCTCCAATCAAAGGCGTCCCCCTGCGATGAGAGACGGGGCAGGAGGTGGCAGCAGGGCAATGGGCGGAGTCCGTACGCTCCTGGTGATGGTCCTGATTGGCTGCGGAGAGGTCACGTGTCTGGACTGGAACCCAATCCCACGCAAGACCGTGAAGCACAGCGAGCTGCGTGGGGTGCAGCGGTTCCGGGCGCCAGGCGTGTGGAACTACAGTGTGGTGTCGCTGGCCGAGGGGGTGGGGCTGCTGTATATCCGATGGCCTGCCCCAGCGCAGAATAAGGGAGAGTGTGTTCAGAAGGGCAAGAACAACCAGacGGAGTGTTTCAATTACGTCCGTTTCCTGCAGAGCTACAACCGGACACACATGTACACCTGCGGGACCTACGCCTTCCAGCCCAAGTGCTCCTACATTgatgtTAAACGCTTCACCCTGGACACCGCTGCCCTGGAGGACGGGAAAGGGAAGTGTCCCTATGACCCAGCCAGAGGACACACCGGACTGATCGTAGatAAGGAGCTCTACTCTGCGACGCTCCATAACTTCCTGGGCTCAGAGCCAGTGATCCTCCGCAGCCTGGGGCAGCACTATTCCATGAAGACCGAGTTCCTGCCCACCTGGCTGAATGAGCCGGACTTTGTTGGCTCAGCGTTGGTGCGGGAGAGCAGTGGCAGTGACATCGGGGACGATGATAAGATCTATTTCTTCTTTGCGGAGCGGGCCGAGGAACTGGACTGTGACAGCGAGCTCACCGTGTCACGGGTCGCCCGTGTCTGCAAGGGTGACGTGGGCGGGGCACGGACGCTGCAGAAGAAGTGGACGTCGTTCCAGAAGGCCCGCCTCCTGTGCACGCTGCCGGAGCGTCACGTGACGTTCAACACGCTGCGCGCCATGTTCACGTTCAGCGACCGCGACTGGAGGAACACAGCCTTCTTCGCCATCTTCCACGCACAGTGTGATCTGCGCCGTGTTTTCAATGGCCCCTTCAAGGAGTATAAGGAGTCTGCACAGAAATGGGTTGAATACACCGGGCAGGTCCCCAGCCCCCGGCCTGGATCGtgcatcACCCGCTGGCACCGAGAGCACGGGTACAACAGCTCGCTGCAGCTGCCCGACGCCACCCTGAACTTCGCCAAGAAGCACCCCCTGATGCACGAGCGCGCTCAGGCCCGGCCCCTGCTGCTGAAGCGCGGCGTCAACTTCACCCGGCTGGCCGTCACCCGCGTCACCGCACTCGACCAGCGGCTGTACAGCGGATGGCTGTACAAGGCGCTCATAGTGGGCTCAGAGGTCCATGTCATCGAGGAGGTGCAGCTGTTTGAGCAGCCGCAGCCCGTGGAGAGCCTGACCATCTCACACAGCAAGAAGTTGCTGTATGTGGGCTCTCGTTCAGAGGTGCTGCAGATTCCTTTGGCTGACTGCGGGCGTTACGTCTCCCTCCCAGACTGCCTGCTCTCTCGGGACCCGTACTGCGCCTGGGACAGCGAGGGGCGAGCCTGCGTGCGCACGGACCAGCACCATGGCTCCTCGGCACTGAAGCAGGACGTGATGCTGGAGACTTTCGGGCGTGGTCGGGCCAAGTTCACGGCCACACCCGTCCCTGGCCCAGatcgcTCCAGGCCGAGGAATGTGACGGTGGTGGTGGGGTCTGACCTGGTGCTGCCCTGCCAACTGGTGTCCAACGTGGCTCAAGCAACCTGGCAGTTCAACGACCGCGAACTGGTGCTGGGCGGGGGGACGGGTACGGCGGGGCGCTTTGACGCGGCGCTGCGGGCCCTGGTGATCGGGGGGGCAGGGCCGGCGCAACAGGGGCGTTACACCTGCTTCTCTGAGGAGCGGGGCGTGCGCTTCCTCAGCCAGACCTACCAGGTGGCGGTGGTGGCCAGCGCGCCCGTATTCATGGAGGCGCGGGCGCCCGAGCCAGGGGCAGGGCTGTTCTGGGTGCTGGTGGTCACGCTGGGCTCGGGCTGCCTGCTGCTGCTCGCCCTGGCGCTATACCTGCGGCGGCGGCTCAAGCTGGCACTGGGCAAGGGTGCCGACATGAAGCCCCTGGAGAGCACGCTGGTGTACCCCATCTCGCTGCCCAAGGAGCCGCCCAGCCTGGTGCACGGCAAGATGGCTTCCGACTCCGACGATCGCTTTTGGGAGACGGGCAACTTCTACTACTCTGATGGCTCACTGAAGATCGTGCCCGGCCATGCACTGTCCCCCCCTACCGCACCGCCCGCCCCGAGCCCCCCCACCGCCATCCCCGGGCAGCCGCTGCACTCCCCCGGCCGCCTCAGCCTGGGCCCCCTGCGTGGCTCCGGCAGCAACGGCTACATCCGCCTCAACCTGAGCGCGGCAGGCGAGGGCGGCGGCGGGGGGGGCGCCGAGTACGCCAGCCCCTTCAAGGAGGAGCTGCGCCGCACGCTGCAGCAGAGGAGCATTCTGCCCGATGCCAACCCAGAGGAGTCCTCGGTGTAG

Function

GO: NA

KEGG:

id description
K06521 SEMA4, CD100; semaphorin 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020743 True 2889 mRNA 0.64 15 32123391 32138907

Neighbor

gene id symbol gene type direction distance location
AMCG00020744 wdr45,LOC102779567 coding downstream 13975 32104730 ~ 32109416 (-)
AMCG00020745 NA coding downstream 40324 32071201 ~ 32083067 (-)
AMCG00020739 NA coding downstream 85236 32024322 ~ 32038155 (-)
AMCG00020735 NA coding downstream 208940 31897326 ~ 31914451 (-)
AMCG00020727 nob1 coding downstream 388419 31731257 ~ 31734972 (-)
AMCG00020751 kat6a,LOC103398109,LOC107697242 coding upstream 49643 32188550 ~ 32212493 (-)
AMCG00020752 NA coding upstream 95247 32234154 ~ 32244478 (-)
AMCG00020753 NA coding upstream 128239 32267146 ~ 32269733 (-)
AMCG00020757 NA coding upstream 150989 32289896 ~ 32291454 (-)
AMCG00020758 NA coding upstream 229211 32368118 ~ 32369718 (-)
G65397 NA non-coding downstream 62094 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 319599 31785515 ~ 31803792 (-)
G65315 NA non-coding downstream 364891 31757451 ~ 31758500 (-)
G65314 NA non-coding downstream 366702 31756262 ~ 31756689 (-)
G65297 NA non-coding downstream 411627 31711534 ~ 31711764 (-)
G65465 NA non-coding upstream 47575 32186482 ~ 32187711 (-)
G65468 NA non-coding upstream 73820 32212727 ~ 32215757 (-)
G65571 NA non-coding upstream 376496 32515403 ~ 32515617 (-)
G65753 NA non-coding upstream 1135269 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1666794 33805701 ~ 33852626 (-)
AMCG00020746 NA other downstream 458 32121885 ~ 32122933 (-)
AMCG00020713 NA other downstream 710568 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1314545 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1385415 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1592255 30449745 ~ 30531136 (-)
G65549 NA other upstream 219331 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 415953 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 468955 32607862 ~ 32610708 (-)
G65641 NA other upstream 516227 32655134 ~ 32657019 (-)
G65679 NA other upstream 747457 32886364 ~ 32891493 (-)

Expression


Co-expression Network