AMCG00020757


Basic Information

Item Value
gene id AMCG00020757
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32289896 ~ 32291454 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020757
ATGCTGTGCGGCGCTGCGGTGGCCGCCTGGCTGCTCTGCGGGGCGGCGCGCTGTCTGACCCTCGACTCCAACTCCATCAAGACCGCGGGCGGACAGGGCAGCCGAGGCGGGCAGGCCCTGCGGTGCCAGGTGGACAGTGAGTGTGCCCAGGGGCAGTACTGCGCCAACCCGCGTGGGCAGGACCCTGTGTGCAGGGTCTGCCACCCGCCACGCCGCCGCTGCCACAGCAACAACATGTGCTGCCCAGGAACACTGTGTATCAACGAGGTGTGCACTCATCTGGAGGTGGGCCCAGCAGCCAGCGATGCAGAGGTGGGAGCACAGCAGGTAAACAGCACCCCCACaatgccccccccacccacccaggGCTGGACCAGCCCGCACACGCCTGTGGACAGGAGCACAAACCCAGCGGAGAAAGGCCGTGAGGGCGAGCGCTGTGTGCGATCCTCAGACTGTGGGGAGGGGCTGTGCTGTGCCCGACACCTGTGGGTGAAGAGGTGCCAGCGCCAGCCTGGGGAGGGAGAGGCCTGCACCAGACAGGGCCTGCGCAAGGCCCCCCCCAGCCGAGAGGCCTTTCAACGCTGTGACTGCAGCCTGGGGCTCACCtgccagccccagccccaggcCCAGCCCCAGGCTCAGGACTCCCCCAGGGAACGTGCTCAGCTCTGGGTGTGCCAGCAAGAGGAGGGgcaagggagaggagaggaagagggggggagggTGAAGGGGAAGGAaggggggaggaagaggaaaggGAAGGGGAAAGAGAAggtgaaggagggagggaaggagaaggggaaagagggagggaaggtGAAAGGgaaggagaagggagagagagcaggcagaggggggaagagagagacggggagagggaaggaggtgGAGTaa

Function

GO:

id name namespace
GO:0016477 cell migration biological_process
GO:0030178 negative regulation of Wnt signaling pathway biological_process
GO:0009888 tissue development biological_process
GO:0048869 cellular developmental process biological_process
GO:0061008 hepaticobiliary system development biological_process
GO:0030900 forebrain development biological_process
GO:0009790 embryo development biological_process

KEGG:

id description
K02165 DKK; dickkopf

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020757 True 897 mRNA 0.67 4 32289896 32291454

Neighbor

gene id symbol gene type direction distance location
AMCG00020753 NA coding downstream 20163 32267146 ~ 32269733 (-)
AMCG00020752 NA coding downstream 45418 32234154 ~ 32244478 (-)
AMCG00020751 kat6a,LOC103398109,LOC107697242 coding downstream 77403 32188550 ~ 32212493 (-)
AMCG00020743 NA coding downstream 150989 32123391 ~ 32138907 (-)
AMCG00020744 wdr45,LOC102779567 coding downstream 180480 32104730 ~ 32109416 (-)
AMCG00020758 NA coding upstream 76664 32368118 ~ 32369718 (-)
AMCG00020764 NA coding upstream 82634 32374088 ~ 32378924 (-)
AMCG00020761 slc23a2,LOC107394182,LOC108440813,LOC106585070 coding upstream 93636 32385090 ~ 32396520 (-)
AMCG00020763 kcnip3a,LOC108440810 coding upstream 106981 32398435 ~ 32406525 (-)
AMCG00020760 pcna,LOC106580445,LOC106585071 coding upstream 148240 32439694 ~ 32443671 (-)
G65468 NA non-coding downstream 74139 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 102185 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 228599 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 486104 31785515 ~ 31803792 (-)
G65315 NA non-coding downstream 531396 31757451 ~ 31758500 (-)
G65571 NA non-coding upstream 223949 32515403 ~ 32515617 (-)
G65753 NA non-coding upstream 982722 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1514247 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1540281 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1669723 33961177 ~ 33962191 (-)
AMCG00020746 NA other downstream 166963 32121885 ~ 32122933 (-)
AMCG00020713 NA other downstream 877073 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1481050 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1551920 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1758760 30449745 ~ 30531136 (-)
G65549 NA other upstream 66784 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 263406 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 316408 32607862 ~ 32610708 (-)
G65641 NA other upstream 363680 32655134 ~ 32657019 (-)
G65679 NA other upstream 594910 32886364 ~ 32891493 (-)

Expression


Co-expression Network