AMCG00020765


Basic Information

Item Value
gene id AMCG00020765
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32455580 ~ 32462337 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020765
GTGACCTGGGGGCTGGCGTTGCGGAGGCGTGTGAAGCAGGTGGCGCCGCTCCTGGGCACCTTCAGACCGAGTGTTGGGCGCTGTTGCCCTCACTGCACCCCCGACAGCGTGGCTCTAAAGCTGCTGCAGTCCCACCCCTCTCTGGGTTTCCAGAACCTGTTGTGTGTGACTGAGAAACAAACACGGTATCGGGGCTGGCTGGTGCgcaggctgtgctgtgtgctgctggTGGGGGGTGGCAGGGTGCCCCCCAGTGACGCCACTCTCACTTCACAGAGTGTATTGCAGAGCCACAGGTCGGGGGGTGGGGAAGGAAGGGAAGGGGGGGCAGGGGTGCAGTCTCTCCTCTGCCCACAGGGGGGCGCCAGTGGAGTGGCCACCAGGGAGCAGGCTGAGCACATAGTCTCCTCCATCAGCACCTGCTTTTGCCCCTGGCTGCTCcggGTGCTGTGCTGGGTGCTGTTGAAGGTGCTGGGCCACCTGCTGTCCAGCGTCCAGCTCAACCTCAACCAGCTGGCCGCCCTGCATGAGGCCAGCAAGCGGGGCTCTCCTCTGGTCCTGGTGTCAGTGCATCGGTCCAGTCTGGATTACGCCCTGCTCCCGCTGGCTCTGTTCTGCCACAACCTGGGAGTGCCCTACAGCGTTGGCCCGCCCAGCCTGGACAGCACCTGGCTGAGGTTCATCCTGCAGAGGCTGGGAGTGATCCTCACTCCGCAATGCCCAATGGGAGAGCAGGGATCCATGACTGACAGCCTGTATCACGCAATCATGCCCTGTTTTGTCGGTGAGTTGCTGAGAGAGGGGAACAGCATGCTGATCTTCCTGGAGGAGGCGTGTCCCTCCTCTCGCCGCCCCTCCCCCCGGGGGGCACAGTGGCTGGCGTGGGTCCGAGGGGCAGTGCGGGCGGGGGCCGTAAGCGACGTCGCCATAGTGCCCGTGGGCGTGGCCTACGACCGCACCGGGCGAGAGACTGGCACCCAGGTACAGACCGGCACAGCTACCACAGGGGAGGTGTACTGGAGGGTGAAGTCTCATGAAATCGAGAATTTTGTCTTTGGAGAGTCCGAGTCTCTGTTTGCGGAGCAGGCCCAGCCCTGGTTGCTGCCCCCCACCTCCTGCCCTGAGCTGCCCCAGGCAGAGCGCCACCTAGTGATCAGTCTGACCACTCACCTCCTGCACTTGGCTTCTTCCTATACCGCGGTGACGTCGACTGCTATTGTTTCCTGTCTGCTGCTTCACAAACATCGCAAGggaGTATGTGTGTCCATGCTGTGTGCTGATTTCTCCTGGCTCTTGGAGGAGGTGCTGTTCCGGGGCCGAGATGTGGGGTTTGGGGGCACCGTGGGGGAGGTGCTGACCCATGCCCTGTCCCTGCTGAAGGGCTGCCTGGTCTTGGGGTCCCCCCCCAGCGGCGGGCCCCCAGTCATTGTACCCAGGGCCGGCCCCCATGCGGCCCTGACACTGTCCGCCCACTGTGAGGTGCTGTGTAGCGTGTTCAGCCTGGAAGCCGTGGGAGcgTGTGCGGTCAGTGCTATGATGAGGGAAGTTGTGAGCTGTGCAGGGGAGGAGGACGGTGACGTCGTGGTGGCGCTGTGTGAGGATCAGCTGACCGAGAGAGCCCTGCAGCTCTGCCACCTGCTGCCACGGCTGCTGCTGCCTccttGCCAGTCTGCCTGCGGTTTTGCTCAGGATGCTGTGGACAGTCTGGTGCGCTGTGGGATACTCACCATGGAGGAGttaccgggggctggggggctgtgTGACCTGAGGCACAGACGGGCCCCCCTGCAGTGGCGTTCGGTGGACGAGGGGGAGGGCAGCGACTCCGACTGTGATGACCCCACCCCGCCACGCTGCTACAAgctcAGCTGTCCCAGGAAGTGTCCGGAGCTACTGTTCGTGCTGTGCAGTCTGCTGAGCGGTCAGCTGAGGGCGCTGTCCTGGAGCACCGACGCCCTGCCCCTGCTGCAGCCCCCCAGGCCAGAGGCGGAGTGTGTTGCCCGGGTGCACAGGCTCCTGCAGGACCGAGCGCAGGCCGAGAGGGGCCACTACGAAAGCTCCTCTCTGCAGATGGCAGCCTCTGCGGTCCACACCTTCACTGACCTGGGGGTGCTGACAGTGCAGTGCGGTGTGGACGGGCGGCAGGCTCTGGGCCTCAGCACTGCGTTCCAGGATGAGGCCCCACGCTTCAGGCTGCACAGCTTCATTGCACAGTTCCTGTTCCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020765 True 2229 mRNA 0.64 18 32455580 32462337

Neighbor

gene id symbol gene type direction distance location
AMCG00020762 LOC107393839,LOC104958878 coding downstream 5704 32444254 ~ 32449876 (-)
AMCG00020760 pcna,LOC106580445,LOC106585071 coding downstream 11909 32439694 ~ 32443671 (-)
AMCG00020763 kcnip3a,LOC108440810 coding downstream 49055 32398435 ~ 32406525 (-)
AMCG00020761 slc23a2,LOC107394182,LOC108440813,LOC106585070 coding downstream 59060 32385090 ~ 32396520 (-)
AMCG00020764 NA coding downstream 76656 32374088 ~ 32378924 (-)
AMCG00020769 adra2b,LOC108440671 coding upstream 31032 32493369 ~ 32495441 (-)
AMCG00020768 NA coding upstream 101908 32564245 ~ 32580573 (-)
AMCG00020775 NA coding upstream 122556 32584893 ~ 32591227 (-)
AMCG00020777 NA coding upstream 131933 32594270 ~ 32598433 (-)
AMCG00020780 NA coding upstream 136640 32598977 ~ 32600643 (-)
G65468 NA non-coding downstream 239823 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 267869 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 394283 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 651788 31785515 ~ 31803792 (-)
G65315 NA non-coding downstream 697080 31757451 ~ 31758500 (-)
G65571 NA non-coding upstream 53066 32515403 ~ 32515617 (-)
G65753 NA non-coding upstream 811839 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1343364 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1369398 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1498840 33961177 ~ 33962191 (-)
G65549 NA other downstream 90438 32358238 ~ 32365142 (-)
AMCG00020746 NA other downstream 332647 32121885 ~ 32122933 (-)
AMCG00020713 NA other downstream 1042757 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1646734 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1717604 30722783 ~ 30737976 (-)
AMCG00020767 NA other upstream 92523 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 145525 32607862 ~ 32610708 (-)
G65641 NA other upstream 192797 32655134 ~ 32657019 (-)
G65679 NA other upstream 424027 32886364 ~ 32891493 (-)
G65756 NA other upstream 906288 33368625 ~ 33369105 (-)

Expression


Co-expression Network