AMCG00020768


Basic Information

Item Value
gene id AMCG00020768
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32564245 ~ 32580573 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020768
ATGGTGCACAAAGCAGAGAAATACGCCTTCCAGACGCCAGAGGGCGGCACTGAAAACCGCAACCGCCGATTGAGCACACAGGCGCAAACACCGGCGTCGCGAAACAAAGCCGAGCAGACGCGGAACAGGAAagAGCCCTGCTTGTCCGCATCCAGCCTGCAGCGGCatgagaggtcagaggtcgtGACCCCAGGACCCCCACTCTGCTTAGTGTCTTCCCCCACAGCCATGGAGCTCACTCACACTGCTCCCCTGCTGCAGGGTGCTCAGATGAAGCAGAGGGTGTTCACAGGGGTGGTGACTCAGCTGCAGGATTATTATGGGATGGTGGACGAAGAGGTTCACTTCCAGATGAGtgttGTGAAGGGCAGGATGCCACAGGTAGGAGAGAAGGTGCTActgttcTTCAAGTCTCCACCTCCCTTGCTGCCAGCCATGGTGGGGCAGAAGCAAGGCATTCTGGGAAGCAAGCCCCAACCTCTGCTACAGTCACCCCTGATCCCTCCCCTGCTTCCGAGCATGCAACAGCCATCTTCCAAACccgGCTTGCTGCAGACTCCCTCCCATGTCATTCCCCATATGCAGTCACCCTGGGGGCAGTTTGAGCCGTGGGCCGGGGGCAGGAAGAGACACAGTGACGGCGGGGGGCGCAGGGGGGTGCGCTGGGATGACGGTTGCTGGGGGGCGGACAGCATGCTGCAGAAACGGCGGCGGTGGCGGGGGGGCCCGGAGGGGGAGGCCGAGGGGCAGAAGAAGGCCAGCACTCAAACGCTCTTCTCACGCTTCTCCAGAGAGAGctctgTGTGTGACACTATGGAGGTGCTGCGCCGGTATCCGCAGCTCAATATTCCAGACAGCTTTTTCCACCTGCATCTCTCCTGGGTGGAGACCTTCCCCCCCGGCCGACCCCTGACCCTGGGGTACCCCTGCCTCTTCCGCACCGGCCTAGAGGAACTGTACCGGCGCTGCTGCAGCCTCCCGCAGGACCAGCGCCCAGCACCAGAGGGCGCCttgCTGGTGTGTGAGCGGGGCGAGGAGCTGCAGTGGCTGGGGGGCCCATGGTGCGGGGCGGAGGATGGGCTGAATCCAGGGCGGGACCCCCAGGTTCTGGTGCGGACTGCAGTGCGCTGGACCCGCCAGCTGGCAGGGCTGGACCTCAGCGCCTGTTCACAGTGGTTTCGGTTGGCGGAGGTGCGGTATCTGAGGGGGGGCGGGGTGGACACCACAGTGTTCTTCCTGCCAGACGCCTGGCACTGCATACCGGGGGCGGCGGCAGAGGAGGAAGGGAACAGCCAGAATGACCAGGGGTCTGAGCAGCAGtGTAACAGTGAGTCAGAGGGGGAGGAGCCTGCCTGGGTGCTGAGATCACGACCCGGGGTGACCTTTGCCCCCATGCCACTGTCCTCTCTCCTGGAGCCTCGCAGCAGCTCCTCTCCAGACACCTTTGAGGTGGGCTTGCTGGCGGAGCTGTTCAACGAGATGCTGCAGCGTGACTTTGCCGTGTGCCTGTACCGTGCGCTGAGCGCCATGGGGAAGCCGGGCGACACCGAGGACTGCCCCCCCCTGcagccaccccccccaccccacagcaCGGACAGGCCCCCAGGCTGGCAGGCGGTGcagcccccctccctcctgctcTCATTCCTGTACTTTGACCAGCAGCTGTCCGGGCAGCTGGCGGAGCGTGACCTGGAAGAGATCCTGCACTCTCTGGGGCTGCACCTCACCCGCGCacagGCGAGGGCGCTTGTGAGCCGCGTGGTGCGGGGTGGGCAGTGTCGTACGGAGGTGGTGACTCATAAGGGCCGAGTGCTGAACCTGCCCAGCCTGCTGACCGCCCTGGAGAGGAGCGAGAGAGCCCGGGTTCGACTGCAGGACCAGCTCACCGCACAGCAGGACAGACTGGCGGGGGTGGAAGCGCGGGAGGCGGGCTGGGCGGCGGAGCGGGCGGGGCTGACCGCTGACTTGACCGAGGCTCGGCGCGGGGGCGGGGACCTCCGGGGGCGACTGGAGCGGGCGGAGAGGCGCAGCGCCGCCTGCGAGAGGAGCCTGAAGGAGAACGCCGGTCACATGATCGCCGTCATAGAGACCATGCAGAAACTGGTGGACAAGACCACCAGCCTGGCCGAGTCACGCAGCGACATCGCAGACAAGGAGTGatggagcgagagagagaggtggcCGCCCTGCCTCGGGCCCTGCTTGCCTTGAGCACCCATCTGTCCCTCCCTGGCACTGTGAGGGTTCCAGCCTGCAGGTCTGAACTGGAAGGGGggagaggacagacagacagactgactgactggctgacaggcacagatacatacagacacactgagatgAGCTGACATACTGACACTAGCAGAGAAAGgctgacacacccacacacactcacacacacaccctctctgcACGCCCCCTTCCTCAGCTGTGGGTGGATGAGGGGGGGTTACGGTGTCGCCAGCGCTCTGTAGATTACCACCTcccctttctccttctctctttctgactttgttttctttctatatttcacattttctgtgaATTTTTTAGAAGAGGTTTTGTATATAACAGCAGGACTGACCCTCCAGTCTGTGAACCGGCCGTTGGGGGATCCAATtagtttttgttatgttttttcaaGGTGTACATTATTGATTAAATACTCCAGAACTAATATACATCTGTGTGTcttctcctttatttatttgtctatcGATCTGTGTTTTTGTCATATTCTCGATGCACTTCTCAGCAGGAAAGTAAATTGCTTCAATTAGTGCCTTAATTGGTCCCTAATTATAAGCGTGTGGGTAAATGTCATGGTGATGCCATAATGGTTGTCCCATTGTGATGTCATTGTGGTGCCCACAGTCACCAGGATTCCGGTGCGGCTGTGCCAGTGGCTCTGTGTGCcgagtgtgtcagtctgtgagTCTCTTGGTGTCAGTGTGCGAGTCTGCCAGTCTtcatctgtgtcagtgtgtctcggTACCAGTGACAGCAGCTTGAGGcctcagtgagtcagtcagtgtgccagtgtttCACAATGCCAGTGTCAGTCTCCACCCGCCTGCCTGTGATGGGTCTCACcctcctgctgctcctgctgggGTTGGCAGTGCGTTGGCCGGGCGTTGGGGGGTGTCTGCAGTGTGACAGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020768 True 3168 mRNA 0.61 19 32564245 32580573

Neighbor

gene id symbol gene type direction distance location
AMCG00020769 adra2b,LOC108440671 coding downstream 68804 32493369 ~ 32495441 (-)
AMCG00020765 NA coding downstream 101908 32455580 ~ 32462337 (-)
AMCG00020762 LOC107393839,LOC104958878 coding downstream 114369 32444254 ~ 32449876 (-)
AMCG00020760 pcna,LOC106580445,LOC106585071 coding downstream 120574 32439694 ~ 32443671 (-)
AMCG00020763 kcnip3a,LOC108440810 coding downstream 157720 32398435 ~ 32406525 (-)
AMCG00020775 NA coding upstream 4320 32584893 ~ 32591227 (-)
AMCG00020777 NA coding upstream 13697 32594270 ~ 32598433 (-)
AMCG00020780 NA coding upstream 18404 32598977 ~ 32600643 (-)
AMCG00020776 NA coding upstream 30918 32611491 ~ 32613957 (-)
AMCG00020781 NA coding upstream 39201 32619774 ~ 32624594 (-)
G65571 NA non-coding downstream 48628 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 348488 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 376534 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 502948 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 760453 31785515 ~ 31803792 (-)
G65753 NA non-coding upstream 693603 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1225128 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1251162 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1380604 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 1401217 33981790 ~ 33982026 (-)
AMCG00020767 NA other downstream 5149 32554860 ~ 32559096 (-)
G65549 NA other downstream 199103 32358238 ~ 32365142 (-)
AMCG00020746 NA other downstream 441312 32121885 ~ 32122933 (-)
AMCG00020713 NA other downstream 1151422 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1755399 30800582 ~ 30808846 (-)
AMCG00020774 snrpg other upstream 27289 32607862 ~ 32610708 (-)
G65641 NA other upstream 74561 32655134 ~ 32657019 (-)
G65679 NA other upstream 305791 32886364 ~ 32891493 (-)
G65756 NA other upstream 788052 33368625 ~ 33369105 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 1641742 34222315 ~ 34239697 (-)

Expression


Co-expression Network