AMCG00020775


Basic Information

Item Value
gene id AMCG00020775
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32584893 ~ 32591227 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020775
GCACGACACTCCCAGCCCACGCCGAGCCCAGCTGCAGCCCCGGCCCCGGCACAGACGCGTCCCCACGCCGCGCACAGGGAGCAGAGGCTGGCGGTGGAGACCCGTGCAATCTGCGCGTTGATCACAGCACAACAGACGGCGGGCCCCTGGGATGCTGCCCAGACGCGGGTCGTGATGCTGACGAGACGGCGCGGGAGTCTGAGTCTGTGGGTGCAGCGCGGTGAAGatcacccctcctcttcctcgggGGGCCGTGCAGAGGTGGTGCTGACCAGGATGAACCTGTACAGGAATTTCGGGAGATTTGTGGAAGCGTGGGGGGAGGGCACAGGCTTGGGGacggaggaagaggagcagggGAAGAAGGAAGTGAGGAAGAGGCAGCAGccgcagcaggaggaggaggtagAAGATGGAGAGGAGACGATTTTGGAAAGGGGCTTGTCCCCCTTGGAGGGGGCGGGGGATGTagcggaggaggaggggaatgGTTTTCTGGAGAAAGAGGCAGAGGAGATAAGGAGtgagaaggaggaggggagCGTTGAAAGAGAACAGATGTCCCACTCGGGGAAGACGTGGAGACCCAGTCTGGTGCTGAAGTCGGAGTCGGAGGACTCGGGGGTGGAACTACCGAGCTGCGAGACCGTGCTGTCGGAGCACAGCTTCTGGCCGGACACGGACACAGAGCAGCtgccctcttcctcctcctccccctctccctctccctttcccttctCCTGCTCCTCCGCCCTGGATTGGGGGGAAGGCCCAGAGGAGATGTTTGCCccagccactgcccccccacccccacctcttCTGCGCCGGGTGGAACAGGCACTGCGCAGAACGGACTGGAGGCGGCAAAAGACCCAGAGACCCCAGCTGTCCCCCGTCCCCTCCCTCAGAGAGGCGGACCTGGAGGACAGCATCCATGTCAATGCCACTCTGCCGCCCGTTTGCAGGGCAGGTCACAGTCCGCCCCCAGAGGTCCCCAGTGGGCCAGGGCCCTACAGGAGAGCACCCTCCCTGGGGCAGAGGCTGTCACAGAGCTGTGGGGGGGGACTGCAGAGGCTGGGGGGTGACACGGTGGACTCAGGGCTGTGTACAGAACCGAGCTCGCTGGACTCGCTGCTTCCCAGTCCTGGCTCTGGTCCTGGGCTGGGCTACCTGGAGCAGGTGTGTCGCATGCTGGAGGAGATGGCCCGGCTGCAGAGGGCCAGTCAggaactgcagagagagagggagcgagtggagagagagaggaggacacTGGGCAACCAGGAGGAGCTGCTATGTGGACAGTGCCTGTGTTACACAACTGACAAGTTCCCACGGACCAATCAGGAGGCAGGCTGTAACCGGCACACTGCCCTGTCTAGCCAATCGTCGCAAGAGGAGGCCCTTCCTCCCTCCCACTTCCGCAagcgatctctctctctgcacagtgACATACAATGGGGTCCAAGGGAGTTCCAGGGTCAGCGCTTCCACAGCACCGGAGACCTGCTGGACACTGAAGCCCTGCCCCCTGCTCTGCACACCAAGCTGGACAGAAAGCAGCGTGGCGGGGTGAGAGGGCTGGTGTACCGTCTGAGGAGGAGATCGGAGAAGAAGGATGAGCGCAAGAGAGCCGCCGCTGAACTGAGCCGGAGAGACACGCTAGACACTGCCGAGCTGGGCACCCGCCAGGGCCTGGGCTCTGTGTTCAAGAAGCGAGAGAAGAACCTGTCGGTGCGCTAGAGACCTCCACCCCCCACTGTACTGCCTACTGCGGGGGATGCACTGGGAGGAGTTGGAGTCTCTGTCAAACTCAGATCTGTCcctttttctatatatttttattatttgtaaagacAACTGCTTTTTTATGGCAGTCTGAcctgtactgtaatatactgtactcaGTTTGGGGCTGGTGACCCTTGACCTCTCTGACTCTGGTGGTTCTGAAGTTCTCCAGTGCATGTGAAGATGTCGAAGACGATGCTATAACGACTGAGATCAGAGCTGGTGGTTAATGCCACATCAGTGAAGGTGTTCTGAATACTGTGACGTGTTTTTCGTGCAAtaatagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggactggtATACCCtgaattatatgtatatacagtatatgttgtATTCAGTGTTATaataaagatgtttaaaaaagtTAACCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020775 True 2202 mRNA 0.59 8 32584893 32591227

Neighbor

gene id symbol gene type direction distance location
AMCG00020768 NA coding downstream 4320 32564245 ~ 32580573 (-)
AMCG00020769 adra2b,LOC108440671 coding downstream 89452 32493369 ~ 32495441 (-)
AMCG00020765 NA coding downstream 122556 32455580 ~ 32462337 (-)
AMCG00020762 LOC107393839,LOC104958878 coding downstream 135017 32444254 ~ 32449876 (-)
AMCG00020760 pcna,LOC106580445,LOC106585071 coding downstream 141222 32439694 ~ 32443671 (-)
AMCG00020777 NA coding upstream 3043 32594270 ~ 32598433 (-)
AMCG00020780 NA coding upstream 7750 32598977 ~ 32600643 (-)
AMCG00020776 NA coding upstream 20264 32611491 ~ 32613957 (-)
AMCG00020781 NA coding upstream 28547 32619774 ~ 32624594 (-)
AMCG00020779 NA coding upstream 38840 32630067 ~ 32640235 (-)
G65571 NA non-coding downstream 69276 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 369136 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 397182 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 523596 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 781101 31785515 ~ 31803792 (-)
G65753 NA non-coding upstream 682949 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1214474 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1240508 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1369950 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 1390563 33981790 ~ 33982026 (-)
AMCG00020767 NA other downstream 25797 32554860 ~ 32559096 (-)
G65549 NA other downstream 219751 32358238 ~ 32365142 (-)
AMCG00020746 NA other downstream 461960 32121885 ~ 32122933 (-)
AMCG00020713 NA other downstream 1172070 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1776047 30800582 ~ 30808846 (-)
AMCG00020774 snrpg other upstream 16635 32607862 ~ 32610708 (-)
G65641 NA other upstream 63907 32655134 ~ 32657019 (-)
G65679 NA other upstream 295137 32886364 ~ 32891493 (-)
G65756 NA other upstream 777398 33368625 ~ 33369105 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 1631088 34222315 ~ 34239697 (-)

Expression


Co-expression Network