AMCG00020781


Basic Information

Item Value
gene id AMCG00020781
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32619774 ~ 32624594 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020781
ATGTCAGGGTCTCTGTTTGCCTGCGCTCAGGGCCAGGAAAATTCCACCTCTCCCTCACTGAAGgtGGCTCCCCTGGCGGCAGCAGTTCGCTCTCACTTCGATGACTGTCCCGACTCCCACTCTGCCTTCTGTTTCCATGGCACCTGCCGCTTCCTGGTCCAGGAGGACACCGCCGCATGCGTGTGTCACCCCGGGTTTATGGGCATGCGCTGTGAGCATGCTGACCTCCTGGCCGTCGTGGCAACCAATCAGAAGCAGCAAACCATTGCCACGCTGCTGGTgctgtctgtgattggctgtgtgCTGCTCATACTGCTGTGCACCCTCATACATTGTTGTCGGAAGCGAGGGTTCTGTGCGTGGAGACAGGGGCTGCCCTGTCGCCCTGAGAAACCGGACGGCCTTCTGAAAGGTGGGGCTTCCTGCTGCAACTCGGAAACAGTCAGTCCAGTGAGCCCTGCGGTCCACACAGTCCCGCGCCTCAGTGATCACAGCGGATCAAAGCAACCCAGCCACTTGCTTGATGACAATGGCGGGGCT

Function

GO: NA

KEGG:

id description
K08774 TGFA; transforming growth factor, alpha

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020781 True 540 mRNA 0.60 6 32619774 32624594

Neighbor

gene id symbol gene type direction distance location
AMCG00020776 NA coding downstream 5817 32611491 ~ 32613957 (-)
AMCG00020780 NA coding downstream 19131 32598977 ~ 32600643 (-)
AMCG00020777 NA coding downstream 21341 32594270 ~ 32598433 (-)
AMCG00020775 NA coding downstream 28547 32584893 ~ 32591227 (-)
AMCG00020768 NA coding downstream 39201 32564245 ~ 32580573 (-)
AMCG00020779 NA coding upstream 5473 32630067 ~ 32640235 (-)
AMCG00020778 pgam2,LOC100691625,LOC101470049,LOC107706476,LOC107700776 coding upstream 18330 32642924 ~ 32644550 (-)
AMCG00020773 NA coding upstream 44317 32668911 ~ 32674378 (-)
AMCG00020784 NA coding upstream 74605 32699199 ~ 32703449 (-)
AMCG00020785 NA coding upstream 122152 32746746 ~ 32748272 (-)
G65571 NA non-coding downstream 104157 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 404017 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 432063 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 558477 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 815982 31785515 ~ 31803792 (-)
G65753 NA non-coding upstream 649582 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1181107 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1207141 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1336583 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 1357196 33981790 ~ 33982026 (-)
AMCG00020774 snrpg other downstream 9066 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 60678 32554860 ~ 32559096 (-)
G65549 NA other downstream 254632 32358238 ~ 32365142 (-)
AMCG00020746 NA other downstream 496841 32121885 ~ 32122933 (-)
AMCG00020713 NA other downstream 1206951 31365663 ~ 31412823 (-)
G65641 NA other upstream 30540 32655134 ~ 32657019 (-)
G65679 NA other upstream 261770 32886364 ~ 32891493 (-)
G65756 NA other upstream 744031 33368625 ~ 33369105 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 1597721 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 2184010 34808604 ~ 34814294 (-)

Expression


Co-expression Network