AMCG00020801


Basic Information

Item Value
gene id AMCG00020801
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 33968192 ~ 33990813 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020801
ATGGGGAGACAGCGACTCTGCATCCCGGGAATCATCGCGACCGCCACGCTCTGTCTGCTGCACCTCTCCCTGGGAGCCGACACGGTGGTGCGCGCTCGCGTCGGCAGCTCGGCACTGCTGGGCTGTAGCCTGTCCCTGCCCACCCCTGGCACCCCCTCACCCCGGCCCTTCCCCCTGCACGTGGTGGAGTGGGTGCGGCTGGGCTACGCGGTGCCCGTGCTTATCAAATTCGGGGTGTACAGCCCCCGGGTGCACCCCAACTACAGAGGGCGTGTGTCCCTGGAGCAAGGGGCATCCCTGCGTGTGGACGGGCTGCAGCTGGAGGACGAGGGCTGGTTCGAGTGCCGCATCCTGCTGCTGGACAGCCTGACGGATGAGTTCCAGAACGGCACCTGGACCTTCCTATCCATCACAGcCCCGCCTGTGTTTTTCAAGACCCCGCCCCCGGTCCAGGAAGCTCTGGAAGGGGATTCGCTGGCAATGACCTGCGGCGCCCACGGCAACCCTCCACCGGTCGTGGCCTGGAGAAAGGACGACACCCTGATTGAGAATGGAGACAAAGTGCAGgtgctCAATGGGACCCTGACTCTGTTCTCCCTGGGCAGAGGCAATGCAGGGGTGTACAGGTGTCACGTGTCCAACGTGGAAGGGAACCTCACGCACTCCACCCAGCTGCTGGTCAAAGGGCCCCCGGTCATTGTGGTCCCGCCAGAGGACAGCACCCTCAACATGTCTCAGGATGCAATGCTGTGCTGCCAGGCAGAAGCCTACCCCTCAAACCTGACTTATCTGTGGTGGAAGCAGGACAAGAACGTCTTCCACATCGAGTCTCTGAAGGGCCGTGTGAAGGTGCTGGTGGACGGCAGTCTGCTCATCTCTTCTGTCACCCCAGAGGATTCTGGGAATTACACCTGTGTGCCAACCAATGGGTTGCTGACTCCGCCCACTGCCTCTGCCTACCTCACCGTCAAGCACCCCGCCCAGGTGCTAGAGATGCCCGAGGAGACGTTCCTGCCCGCGGGGATGGAGGGCACCATCAGCTGCCCGGTCCGCGCTGAGCCGCCACTGCTCTTCGTCAACTGGACCAAGGACGGGCGGCAGCTCAACCTGGACAAGTACCCGGGCTGGATGGTGAACTCGGAGGGCTCAGTGTTCATTGCAGCGGCGAACGATGATGCAGTGGGCATGTACACCTGCACCGCCTACAACAGCTATGGCACCATGGGCCAGTCCGCCCCCACCCGCGTCATCCTGCAGGACCCCCCCTCATTCCGGGTGAGCCCCCGAGCAGAGTACCTGCAGGAGGTGGGGCGTGACCTGGTGGTACCCTGCCAGGCCAACGGAGATCCCCCTCCCAACATCACCTGGAGCAAGctgggTCTAGTCCCTCGCTCTCCGTACCAAGTGGCAGCGAACGGCTCCCTGCTCCTGCGCCCGCTGGCCAAGGACCACCAGGGGGGGTGGGAGTGTCGCGCTCGTAACCGTGTGGCCACAGTCAGCGTGCGCACCGCCGTGTCCGTGCTGGGCACCAGCCCCCATGCAGTGACCCTTGTAACCCTCGTTCCGGGGATCAACAATGTCAATGTCTCCTGGGAGCCGGGCTTTGATGGGGGATACTCCCAGAGATTCACTGTCTGGCTGAAGCAGGTGTCCAGAGGGAAGCACGAGTGGACATCGGTGGCAGTGCCGTCCCCACAGTGCTCCCTGCTGGTGGGGGGGCTGCTCCCTGGCACTGGGTACCAGTTCAGCGTCCTTCCCCAGAACAAACTGGGCTCCGGGCCTTTTAGCGAGATCGTCACGGCATTCACACTGGGTCAGTATCATACCAGTACCGTTCCCCAGAGCAAACCCCCACCGACAGTGAAGTCCATCCCCATTCTGGCTCCGCCCCGGTCCTTGTTGGCCAATCAGAGTGCAGGAGGCGTAATCTTGCAGTGGTTGCCACCCCTCTTGCAGTCTCCGCCCGTCACAGGCTACATCCTCCAATCACGGCGTGAGAAAGGGGAGTGGGTGGTGCTCGAGGGACTGATTGAAGCCAATCAGAGTGAGATACTGGTCCAGGGACTGCTGAAGGACTATAACTATGAGCTGAGGATGCTGTCTCGGGGGGAGAAGATAGTCAGTGAGCCCAGCGAGTCGGTCAACATCTCCACTGCAGGGATGGGCGCCTACCCCACTAGGACCCACCTCTCGGAGCTCCTCCCAGAGCCGCTGTTAGCCGGCGTGGTGGGCGGGGTCTGCTTCCTGTTCGTGGCCATCATCCTCTCGACCGTGACGGCCTGCGCCATGAGCCGCCGCAGAGAGAGGCGGCGCCGGAAGAGGAGGGAGGATCTCCCAATCGCCTTCCAGAAGGGGCCGTCTCCAAAAGCTAGCTCGCTTACTGACAGCCCCGACAGCATCGTAAAACTCAAGCTGTGCCCCCTGCTGTTCAGCCACCGctcctcctccccttcctcctcctcctcctcctctgaccGCTGCGCCTTCGAAAAGGCCAGCCGCAGTGAGTACCAGGACCAGCGCACCCAGCTGCTCTCCCACTCGGTGCCGCCCCCCCGCTACACGCTGTTCGAGAGCCACCTGGGGGGCCTGCCCTCGCCGACCGCCGCCATCGAGTCCATCTCCCGCGGCCCCGACGGGCGCTTCATGGTGGCGCCGTACGAGGAGGTCAAGAAGAGCCTGAAGAAAGACTTCCCCCAATGCTTAGGGGCATCCAAGCCCTGCACCCCTTCCTTGCGCAGGGGCTCCCCGAAATCGGACTACCTCTCGGAGAAGAAGGAGTCCCCCTCCCCGTTCTCCCTCACCGTGGACCTGCCTCTCCCCGCCGGCCCCCAAACCTCCCCGGGCCGGGTCCGCATGATGGCCAAGAACTTCTCCAAGAGCGCCTGCTTCTACAGCGACGAGGAAGGGGGCAGCTACCGGGaactggaggaggaggaggtgcgGGGCGGGAGTGTGGACCGcaaggaggagaagaggagtCGGGACTCCCTGAAGAAGTACCGCATGTCGGGGCAGACGAGGGAGGACGACCCCAACTGGACCGCTCTGAAGAAAGtgagggagcgggagagggagagggagagggagcgggagagggagcGGTACAGGCACTCCAGCTACCTTCCCctggagaaggagagacagCTGACGAATGCGAGTACGCTGGTGTCccagatggagagggagaggggggtggagaGCCTGAGCAAGTGCTTCCAGCtggcaagagagagggaggagatggagagagaactGGAGCGCTACACCACCGGCtggaagagagagggatggagggacgGGGACAGATCGGTGAGCCAGGGTAGCCTGCGTACGGGGAccggagggaaggagagagaggcggtggaggaggaggaggaggaggacgaggagccGGTGTGGAAGCTGCAAGAGGTCACTTTCAGGGCCAAAAGCAAGATGGCAACTGGGCAGGCACACAGGGCGAGCGGCTTCCGGAAGGGCTGCTATTTTGGGAACACCAGCAGCCCCTTGAGCCAGGTGTCTGTATCCTCCTCCTTCATTCCTTGGGACATCAGCCCCGTGACTTCCGTGACCAGCCTGGTCCCGGCCCAGAGCCCCCTGGAGAAGGTCACCGCCCCTGCCGTGTCCAGGGTCAAGGCCGGGGGCGAAGAATCGGAGGTCTCGGGGGCCCATGATCGTTCGGAGTCGCCTGTCACCCAgtgcacctctctctcttcctccctcctctccccgACTTCTGACCCCCTCCCTCAAGGTCCTCCCGGGGACGTCAGGGGAGCCAAGTCCCGGTACCccgagagaggagaggaaaggggagagagggagatgggtcACTCTCTGCCTGAAGAGGGCTGGAGAGGGGAGTCAGAGGAGGAGTCATCTGCTGTTACCTTCCTCTCCgagggagcaggagagagaaCGACTGAAACACTAGTGGACACGTACTCCTCCAGGGCCACCCTGCAGTCCAAAGCAGATAGGCTGGAACAGAGGTTAGGACAGGTCAGCTGTGTCTCCAGGACTGGgtcggagagggagagatgctCCAGTCCCCCGTCCCTCTGTCCTGACGCCAGCCAGAGCAGCAGCCTGGAAATGGAGAAGGAAGAGCGGGACGAGAAAGATGAGAGACTCTTGGCCAGTTCTGCCTTCCCAGGGTATGAGCGAGGGAGGGGCTGGGGGacggcaggagaggaggaggaggagagggagggtgagagCAGGCCGCAGCCCCCAGACAACAGTACCCTGCTGTCCTCAGACTTTGAGAAAGAGGGGATCAGGGTGCGCTCGAGAAAGAGCGATAAATACCTCTTCGCTGACAGCCCCAGCAGCATGTCCACTCTACCTCTAGTGGAGAACAATGACGTCCACAGTGACCAGTCAGCCTTCTCCATCAGCAAACTGTCCGATTCCTTGAAACCGAAGCAGAAGCCGCAGTGCTCCCCTAATTCCGTGGGTTCCTTGCAGAGGTCTAGGGCATCTCTTCTCCAGACCAGCGCCATCCTGGAATATCTGAGCCTCCCAGGTTTCATCGAAATGAGCGTGGACGAGCCGATGGAGGAGACAGAAGATGTGGACTCATCTGGGCCTATCTCCAGCCAGCAGTCTGTGAGTTGCCTGAGAGACGAGACAGAGTCAGTTACAAGGGACCGTGAAGCTTGTGTGCAGGAAAATGGGGAGGCCTGTTCAAGCCAAAAATGTGCGAGTGTTTTGGACGATAAGACGGCAGTTAGCCATAGTTTCTGTGGCGACTCAGTGCCCAGTGAGGCACAGAAGCTTGGACTTTTCATAGACAGGCTTGAATCTTCGAATTCCAGCTCGAAAGCAGGGCATTTGGAGAAAGGTTGGCCTACATTGGAGAGAAGCCTTCCGACTCCCAGTTTGGAGTGCGAAACCAAACCAGATGATAACAAAGATGACAGGCCTGTTTTTGGTCCAAATCCTGGGACTTTCCTAAAAGACAAGACCGATTTGGCCTTAGAGGCAGGGCAGGCCAGAAACAATCTTGGTGCTGGCTCCGCTGGGAAGGCGGCACATCACCAAAATGAACCCCACGCTACCGGATCCAACCCTTTGGATAGAAAAAGGGATCCTGCGTCTGAACGCCATCAAAAACACCGATTTATCCTGGAAGCTCAGGGCAGTAGGAGTAACCGATCCTATCAATCCCCTGTGCCCTTCATGAAGAAATCAGTCAGCAGCGGCCCAAGCAGGACTCTGTCCTCAGCCGACAGACCAGGGCCTTTCCTGAGGAAATCCCTCAGCTTGGGATCCCAGAAGTGGGAGACTTTCGAGAACCCCAGACCTCAGCTCTCTGAGAGGTGCTTCCAGGATGAACTGGCGTTCCCGGACGTCCGTATCAAGTCGCACAGCCTGGGCCGCAGCCCTTCATCCAGCTTCTACCCGAAACCAGGGCCTTTCCTGAAGGGGCCAGCCGGTTACAGACCCCCAGTGCGGACCGGTGTGCAGGTGGCGCCTGGAGATGCTCCTCCCAGGCAGGAACTGGAGGTGCACCAACGAAGACGGACAGTGGTGGCATTCCCGGAGACGCCCAAGTGGCCGTTCGAGTACCAGAACGGACCGGGAACCGCGCAGACTAAAGCGGTGCTCTCAGGGCCCCCCCACCTGGCACAAGCCCCCCTACCACAGCCCGGGGATGGGGGAGACTTGTTGCTGCCCCACCCTGACTCGATACGGGGCCCCGTCAGAGCCTTCCTGCCCAGGGGCTTCAGCTGGCCCTCTCCCTACCACGCCCCCTTCGAGCCCCGCCCTCCAGAGCtggagaaggggagggaggcGGAGGCGGAGATGATGAGGGACCACCGGGACGCCAAGGAGGCGCGGGGCAGCTATGCCAGCCAGAGCAGCGGCAGGGGCAGCGTGGGCCCCACCTACGCGCCCTCCCTCCTCCGctactccctctccctcacccccTCGCTGACCGGCTCCCCCGAGACCACGGAGGAGAGCGCACGGCTGGAGAGGTCAGCGCTCGACCTGCAGGAGAAGAGAGCGACCAAAAGGAGGAACACGTCTGTGGACGAGAGCTATGAGTGGGACACCGGGGACTTCGGTGTGGATTCCGAGATCCTGGAGACGCTGCGCGGATTCTGCTGAGGAGCGGCCAGCCAATTCCTGAAGCCTCCGCCCGCCCACTCGCACCCCCGCACCCACACAAATGGACGGCCGCCGGACGCTAGGGGTCTCACCATTGGACAGCCTGTACGTGGGTCGGGGGAAAAAAGATTGCGATTGGACTGCTGGCAGAACAATAAACCAATACACGGAGAGATAAACGCTGCAGGGACGGAACAGAGAGCAAAGCGACCGATTGTAAAAACAGAGGAGGCAACCCGACTGAAACTGTGCGCCCTGATCTGTGCCAGGGCTCCCTTCTCTCACAGTGTGGAGACTGACAGTGTGTGGCCCCTTCATTAAGACCCCATGGGCACCTTACAGCGCCGGGGGGAGCTGGACGGACACACCACATTCCTTGCCCCCGAATTGTTATGATCAATTGTCGATTGCCATAATCCACGGGACAGCTTTATCCAGGTACGAAGCCATAGCAGCGAGGACTGTTCGTTCGCTGAATCGTATGTGTTCTGGTTGTTTtgacgttgttgttgttgttgttgttttactccTGTTCGTGTGTGTGGCCCCGTGCGTGTTGTTCTTACTGTGGTGCTCTGGTGGTGGTGCGCTGAAGACAGTTTTTTCAATCACTAGCTTATTCTTGTTGTGGACTgtggattgtttttcttcatttttatttgcttgtttgttggtAAGGCCTGGATTTTACtcataaagacacacacacacacacagactaaacTAAAAAGAAACTTAAATACCAGCGCACCTCATATTTCGTATATGAGTCGGTGTGCTCTGAATAAATGGGAGaatcaatattttttctatttttaagcaTCTTGTCATTTATGGGTAAAGTCCAGATCCCTGATGTTTTAGGAGGGATGTTGTATCTATAATGATATAGCAAAGGAGTCCGAAACAGCTGGAAAAATCCTATAGAGCTTCCTGAACACTCACACATcaggtatatttttaattaagatgaGATATTTTTATTGACAAATCCTTACGAATATGAATTTTACTCAAATACAGCTTTACACTGATatataaagtgtattttttcagataGAAATTATATCTTGGAAGAAAGATGCAGGAATGTGTAACTTTGATAAAGACAAGAAAAAGGGCAGAAACTCTGAAAGCTTTTGATCACAGAGGCTTctatgggattttttttccaaagtgtTTACAGCTGACACAGAGCTGGGGAGCCACCCAGCCTGTAGGGATGTGTTGTTTATGTTCAAGACGTTTGTAAGCTGACTGCAACGCTGCTGGCCAGTTTCCATGCCAACTCCAGAGACCCAGCAGCTTGTGCTCCTGTGCAAGGGTTTACTAGAGCCGTCAATCGGTGctatcagtcaatcagtcaagCGATCGATCGATCCGCTATCGAGGCAGGTCAAAATATATCAAGGCGCTTGGATGCAGGCGGGAAAAACCTCTGGATCAGCTTCCTAGagcaaaaatgtataacatttatCCTTGCATTTATGTTATAATTGATGTGATATATTTATGGGCACTGTGCATCATAAATATATCACATCAATTATAACATAAATGCAAGGAAATATGTTTGATAAAGATGTATCTGCCCTGCTTTTGCTGACTCTGGCGTTGATGTTGCTGCCTCTTGCTCTGCAGTCTGCCTGCATTCACTGAAGAAGTATAAAAGGggagaaacatgttttattttgttttttagtttgtttctgttaatgttctgttttttcactCCGCTGTCAGTATCCCTGGCTGAACCACTTGCAGGAATGTGTTTTCTAGCAAGCGCTGCAGTAAGGGATCAGGGGGGATTAGGAGTGGTGATGGGGGGGCTCTCACTGTGTGAAGACCCCTACTGTCACAGCAAAGGGTGCTGTGGGCTCACACAGTTGCAAGCAGCCTTCGTTTTCAGTGCCCGCAAATCTACATCAGAATGCTGCGTTTCCAACATTCTTCTTTGAGAAACATGGGGCGCTTAAAGGTGGATATCGCCCCCAAACTGTGTGCATTTTCTGAATTATGCAGGGTAACTACCACAATCTCAAACTCAGCATCTTCTGCCCTTCTGTTCCTGGGCCTGGAGCCCTTTCTCTCTCCAATCCTTCCCTGAATCATGTCACTTATTGGACATACACCACATTGTTTTAAGGTCCTTTTCACCCCttcgaaaaaaaaaaggcttaaaaGATTATTTGGAGTCAAAGACACACTGCCTGTTACATAATTGGCAGCTTGTGGTGAAGGATTCAACTGGCCCAGTCAATCCACTTAATCAGTCCCACTGCATAACTGGCGGGCTGGAACTAAAactgtacaaaatataaattcaaagc

Function

GO: NA

KEGG:

id description
K22655 IGSF9; immunoglobulin superfamily member 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020801 True 8456 mRNA 0.57 20 33968192 33990813

Neighbor

gene id symbol gene type direction distance location
AMCG00020797 dpysl2b,LOC107678023,LOC107560521,LOC108427246 coding upstream 73655 33881738 ~ 33894537 (+)
AMCG00020795 LOC107720674,LOC107687791,LOC108427248,LOC107561399,LOC103036208,LOC100689723,LOC102791612,LOC101471601 coding upstream 123674 33841870 ~ 33844518 (+)
AMCG00020794 ppp2r2a,ppp2r2ab,LOC106585558 coding upstream 132739 33819061 ~ 33835453 (+)
AMCG00020793 LOC108413329,LOC107552197,LOC107671041 coding upstream 307642 33656626 ~ 33660550 (+)
AMCG00020791 NA coding upstream 788506 33163415 ~ 33179686 (+)
AMCG00020802 NA coding downstream 8664 33999477 ~ 34006803 (+)
AMCG00020799 NA coding downstream 24474 34015287 ~ 34019959 (+)
AMCG00020800 NA coding downstream 42377 34033190 ~ 34040263 (+)
AMCG00020806 NA coding downstream 160667 34151480 ~ 34155511 (+)
AMCG00020809 NA coding downstream 207685 34198498 ~ 34202915 (+)
G65670 NA non-coding upstream 1086074 32879099 ~ 32882118 (+)
G65594 NA non-coding upstream 1281872 32629723 ~ 32686320 (+)
G65579 NA non-coding upstream 1382478 32563430 ~ 32585714 (+)
G65534 NA non-coding upstream 1523548 32443881 ~ 32444644 (+)
G65503 NA non-coding upstream 1660473 32307438 ~ 32307719 (+)
G65829 NA non-coding downstream 59181 34049994 ~ 34051037 (+)
G65831 NA non-coding downstream 71339 34062152 ~ 34062595 (+)
G65873 NA non-coding downstream 231533 34222346 ~ 34261929 (+)
G65877 NA non-coding downstream 249076 34239889 ~ 34267100 (+)
G65891 NA non-coding downstream 425782 34416595 ~ 34480123 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 7610 33954806 ~ 33960582 (+)
G65705 NA other upstream 859766 33107873 ~ 33108426 (+)
G65691 NA other upstream 978747 32946731 ~ 32989445 (+)
AMCG00020783 dock5,LOC106585561 other upstream 1223457 32707933 ~ 32744735 (+)
G65590 NA other upstream 1373738 32592482 ~ 32594454 (+)
G65830 tet3,LOC106906237 other downstream 68298 34059111 ~ 34059465 (+)
AMCG00020820 NA other downstream 413721 34404534 ~ 34411620 (+)
G66008 NA other downstream 793399 34784212 ~ 34787474 (+)
G66060 NA other downstream 977031 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 1156790 35147603 ~ 35149418 (+)

Expression


Co-expression Network