AMCG00020802


Basic Information

Item Value
gene id AMCG00020802
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 33999477 ~ 34006803 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020802
ATGGCGGACGCCCTGTCCGAAGCCAGTGACCTGAGCGGCGATGACGGGCAAGAGGCCTGGCTAAATGAGAAGTTTTCCCCGGAGCTGCTGGAGACGCGGTCCGAGATCGTGGAGTGTGTCCTGGAGCAGCTGTCCCACATGGAGCAGAACCTGCAGCGCGTGCAGAAGGGCGACCTGAAGGCCAGCGTACACCGCATGGAGATCGACCGCATCCGTTACGTGCTCAGCAGCTTCCTGCGCTCGCGGCTGCACAAGATTGAGAAGTATTTCCCCCACGTCCTGAAAAAGGAGAAGGCCCGGGCCGAGGGAGACCCATCCTACTTGTCCCCGGAAGAGTTCGCCTTCGCTAAAGAGTACCTGGCCAACACGGAGACCTACCTGAAGAGCGTGGCTCTCAGACACATGCCTCCCAACCTCCAGGCTGTGGACCTGGCCAAGTCGGTGCCTGAGCCCAGCCTGGACTCGGAGTATGCTGTTGACATGGAGGAGGGCTCACAGCACTTGATGCGCTACCGCACTATAGCGCCCCTGGTGGCCAGTGGGGCAGTGCAGCTCATTTAGGAGCGTAGATGCAGAATGGACGGTGACCAGCTCGGAGgAGCAGAACCCAATTTCTGTGCTGCCTGGCCCTGTCCTGTTCCGCCCTCAGTGGAGCCCCGGCCCGGTACACAACACATCACCCTGCTCTGtgtcagaaagaaaagaaaaccgaACAGACTTTTCCAGACCCAGATTGTAAGGGAACTTCCTCTCCCCTCTGCCATCAAGACTGTCTGTCCTGCCAACTCTCTCGGGTTCAACAACAACGAAAGCTTGCTGTGGACAGGGGCGTCCATGAAGATGAATATTTAGGGGTTTCTTCGGTTTTAGTTTGCTTTTGAAGATGCAACTTCATCAAAATCACCTGCAGATTCAATCAAATGTTGCTAAATGAAGACTGAGCCCTGAGGAAGGTAACAGGGCAGAGGAGGGCATCGTATATATAGgccatatgtatatatatataatcatagattttgtattaaaataatcccTGCCTGGGTGTCAGAGAGGTGTGCAGTGATTGTGTCGGTCTGTGGAACTGATAAACCATCAAGGAGCAGAGCAAGGAAAACGGGGTTGACACCCCCACATAGACCCTATGAGATAATCTGCTGAGACAGATTGACAGCACTTCTGATCTCAGTGACCAGAAAACTTCTACTTCTGCCTCAGTGTTTCAGGCCTTTGTTGGGGGGTGGCAGCTGGCCAGGGCCTTCGTAGCTGTGGACTGGGGGCCGAAGCCCTGGGGCCCTGCTTGTGTGTGCCAGCTCCTGTAACTGATCAATTGTCCGCACTTGTTGATGGCAGTTTGGTAACTGGTTGTGGCAGTTTGGCTTGGGGCTGCATCCCAAATTTCCCCCTGCTTCCCCCTAAGCACTTTTATACAGCAATTAAAAACTGCACTGCCCgtttcccctctctttctttctcaaatTGTATTAGCAGGACGCTCTGGTGTTGACAAAGCtttcaaaatatcacaaataatattgcagaacaaatatattacttattttgtataaCTAATTTATCAGTAACTGCTCAAGGCAGGCAGGGTGTCTATccactgtccctcaggctgtggcaggtcTTATTGTGGTCAGACAGGAGGTTACATTCtggtgtttctctctctttctctctcttccatgtCCAGCGGTGATGTTCTTTTGAAAGGTACAGATGTACAGACCTGGGATTTTTCCACCTggatagaaaattaaatatgaatgtgaatgATTAATCCATGAGAAAGATCCTGTTGcatcttcagttttatttgtgtgcctCTGGTCATCAGTACAGTGGGGAGGTTTTGTCCTGct

Function

GO:

id name namespace
GO:0006260 DNA replication biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K10735 GINS4, SLD5; GINS complex subunit 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020802 True 1868 mRNA 0.51 8 33999477 34006803

Neighbor

gene id symbol gene type direction distance location
AMCG00020801 NA coding upstream 8664 33968192 ~ 33990813 (+)
AMCG00020797 dpysl2b,LOC107678023,LOC107560521,LOC108427246 coding upstream 104940 33881738 ~ 33894537 (+)
AMCG00020795 LOC107720674,LOC107687791,LOC108427248,LOC107561399,LOC103036208,LOC100689723,LOC102791612,LOC101471601 coding upstream 154959 33841870 ~ 33844518 (+)
AMCG00020794 ppp2r2a,ppp2r2ab,LOC106585558 coding upstream 164024 33819061 ~ 33835453 (+)
AMCG00020793 LOC108413329,LOC107552197,LOC107671041 coding upstream 338927 33656626 ~ 33660550 (+)
AMCG00020799 NA coding downstream 8484 34015287 ~ 34019959 (+)
AMCG00020800 NA coding downstream 26387 34033190 ~ 34040263 (+)
AMCG00020806 NA coding downstream 144677 34151480 ~ 34155511 (+)
AMCG00020809 NA coding downstream 191695 34198498 ~ 34202915 (+)
AMCG00020808 mthfd2,LOC106580352,LOC107728122 coding downstream 227022 34233825 ~ 34238280 (+)
G65670 NA non-coding upstream 1117359 32879099 ~ 32882118 (+)
G65594 NA non-coding upstream 1313157 32629723 ~ 32686320 (+)
G65579 NA non-coding upstream 1413763 32563430 ~ 32585714 (+)
G65534 NA non-coding upstream 1554833 32443881 ~ 32444644 (+)
G65503 NA non-coding upstream 1691758 32307438 ~ 32307719 (+)
G65829 NA non-coding downstream 43191 34049994 ~ 34051037 (+)
G65831 NA non-coding downstream 55349 34062152 ~ 34062595 (+)
G65873 NA non-coding downstream 215543 34222346 ~ 34261929 (+)
G65877 NA non-coding downstream 233086 34239889 ~ 34267100 (+)
G65891 NA non-coding downstream 409792 34416595 ~ 34480123 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 38895 33954806 ~ 33960582 (+)
G65705 NA other upstream 891051 33107873 ~ 33108426 (+)
G65691 NA other upstream 1010032 32946731 ~ 32989445 (+)
AMCG00020783 dock5,LOC106585561 other upstream 1254742 32707933 ~ 32744735 (+)
G65590 NA other upstream 1405023 32592482 ~ 32594454 (+)
G65830 tet3,LOC106906237 other downstream 52308 34059111 ~ 34059465 (+)
AMCG00020820 NA other downstream 397731 34404534 ~ 34411620 (+)
G66008 NA other downstream 777409 34784212 ~ 34787474 (+)
G66060 NA other downstream 961041 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 1140800 35147603 ~ 35149418 (+)

Expression


Co-expression Network