AMCG00020809


Basic Information

Item Value
gene id AMCG00020809
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34198498 ~ 34202915 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020809
agagagagagagagggggacagcgTGGTTGTGTGGAAAATCGGggccttttttgtgtgtatgcatgtgttgtgtgtgtgggtgtgtacgTATTTAGACAAGGAaaatcattagtattattatttcgATCGCCGTGCCTGCTTTCTCGGGGCCCTCTTCTACTTTAATTTCACTACCGTGTTtgagaaaacacacaacagacagCCGTGAAAGATGTCTTCAGGTTGTCAAAAGACCACTAGCAGGGCGATCCCGACCCGGAGAGTGATTGTCAACGACGCTGCACAAATGCCGCACGATTACTGCACGACGCCGGGGGGGACCTTGTTTAGTACTACACCAGGAGGCACCAGGATCATCTACGACCGGAAGTTCCTGATGGACTGCCGCAACTCGCCCGTGGCCAGAACCCCGCCGCGGTACCTGCCCAACATTCCGGGGGTCACCAGCCCCAGCAGAGAGGAGGACAAGCCGCAGCCCAACAGCGTGGAAAACAATAGCAACCACCTGGAGAAGACAGTGGATGATGCACAGTTCGAGATGGATATCTAAGACGCACGGGGGCAATCTCTCTGTCCCAAAGAGAAACGATGAAGACAAGGAAGGCAGAGGAAGatgaagaaaacataaaacaaaaaaataaatacaaatcaggtGGTCTTCAGAATCGACCGATAGGCTTTGCGGATTAGCTCACTTCCTGTTGTCCAGGCGGCCGTTTCCTCTTCTTCCCGTGAGTCGGAGGGAAGTTATattggacaaaaataaaaataaacaaaaaaatcactttcTGAGCTACTATCAATACTACTACTGAGAACAAATCTGCATTGGTTCTGTTGTGGTCCATCAGAGGAGTGCAGTGCAGCGCCGGGGCCCCTGCTTCTCCGcagtatgaatgtgtgtattcCCCACAGGGGCCTCCAGTAAGAATGCACGGCTTCGGTCTGACCCGGCCGTGCACGTGGCAGCTGTTAAGACAACATGCAAGCTTGCTTTCTGTGTGAAGTACAGTACACGAGTTCATACTGTTAACCGTTCGAACAGCCATGTCTTTCTTTGTTGTGTTGGGCCCTGAGTTCTGAGATTAACAAGCCAGAATCCCAAAGATctgatttgtaaaaaaaataaatgtctatatTTCAGTTGCACAATTTGATTTGATAACTGACCCTCTGATCCCTccccacacttttttttttttttaaagctaagaAGTTTGATAAAAAATTGATTCCTCACCAGaagtgtcattttttttttttgctggcaAGGAAGGACATGAAGGACATGTTTCCACCAAACAGTGATGTGAAGGG

Function

GO:

id name namespace
GO:0045947 negative regulation of translational initiation biological_process
GO:0008190 eukaryotic initiation factor 4E binding molecular_function

KEGG:

id description
K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020809 True 1318 mRNA 0.47 3 34198498 34202915

Neighbor

gene id symbol gene type direction distance location
AMCG00020806 NA coding upstream 42987 34151480 ~ 34155511 (+)
AMCG00020800 NA coding upstream 158235 34033190 ~ 34040263 (+)
AMCG00020799 NA coding upstream 178539 34015287 ~ 34019959 (+)
AMCG00020802 NA coding upstream 191695 33999477 ~ 34006803 (+)
AMCG00020801 NA coding upstream 207685 33968192 ~ 33990813 (+)
AMCG00020808 mthfd2,LOC106580352,LOC107728122 coding downstream 30910 34233825 ~ 34238280 (+)
AMCG00020814 NA coding downstream 139776 34342691 ~ 34357137 (+)
AMCG00020817 NA coding downstream 190786 34393701 ~ 34402124 (+)
AMCG00020816 NA coding downstream 210699 34413614 ~ 34418667 (+)
AMCG00020818 NA coding downstream 217919 34420834 ~ 34426849 (+)
G65831 NA non-coding upstream 135903 34062152 ~ 34062595 (+)
G65829 NA non-coding upstream 147461 34049994 ~ 34051037 (+)
G65670 NA non-coding upstream 1316380 32879099 ~ 32882118 (+)
G65594 NA non-coding upstream 1512178 32629723 ~ 32686320 (+)
G65579 NA non-coding upstream 1612784 32563430 ~ 32585714 (+)
G65873 NA non-coding downstream 19431 34222346 ~ 34261929 (+)
G65877 NA non-coding downstream 36974 34239889 ~ 34267100 (+)
G65891 NA non-coding downstream 213680 34416595 ~ 34480123 (+)
G65954 NA non-coding downstream 309742 34512657 ~ 34512879 (+)
G65956 NA non-coding downstream 311131 34514046 ~ 34515896 (+)
G65830 tet3,LOC106906237 other upstream 139033 34059111 ~ 34059465 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 237916 33954806 ~ 33960582 (+)
G65705 NA other upstream 1090072 33107873 ~ 33108426 (+)
G65691 NA other upstream 1209053 32946731 ~ 32989445 (+)
AMCG00020783 dock5,LOC106585561 other upstream 1453763 32707933 ~ 32744735 (+)
AMCG00020820 NA other downstream 201619 34404534 ~ 34411620 (+)
G66008 NA other downstream 581297 34784212 ~ 34787474 (+)
G66060 NA other downstream 764929 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 944688 35147603 ~ 35149418 (+)
G66149 NA other downstream 960898 35163813 ~ 35164985 (+)

Expression


Co-expression Network