AMCG00020823


Basic Information

Item Value
gene id AMCG00020823
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34445279 ~ 34450197 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020823
atggcgGGCAGCAGGACGTTGGGTGTGCTGACCGTGTGGCTGCTGACCAGCGCTGCGGGGTCCCAGTACTGCCAGAGGGGCGCAGAGAAGCTCAGTTTCCACGATATAAACCAGCAGGTGTCCCTCGAGACCCTGAGCACTGCAGGCTCGCTGGGACCTCTGTATGGCTTTGTACACCAGTTTCTGGACGCAGTGCAGCCCAACCCCTTCCCTGACGatttaatcCGGGACGCTTTGAACAATGTGTGGGATGTTGGGAAGGTGATGCGCTACCTGGCCGGCTACACGGTGTGCGCCATCATCGCGGTGCTCTACGTGCTGGTCGTGCCCCTGGTGGGTCTTGTCTTCTGCTGCTGCCGCTGTCATGGGAAGTGCGGGGGACGGGTCCAGCAGGATCTGAAGTGCCAGCATGGCGCCATGGCAACCTGCTCGGGcgccaccaccatcatcatcctGGCAGGGGTTGTCCTTGCTTTCACAGCAAACAGCAGAGTGACAGAGAGCGCACAGACCAGCGGGACATCTCTCTGCTCCTCTGTGGGCAACGTGGCAGACTTCCTTACCTCCGTATCCCAGAATATGCAGAACATTGTCAATCAGTTCTCTGTAGCcaacaacacatttcaaaatgaattgaaaGATGAGGACGATTTATACGGTAACGCGATTGTCTCATCCCTCCAGTCCTCAGTCCAAAGGACACTGAAcgatctctccatctccataaaagATGCAGCGAATGCTACAGAGCTCCTGCAGATCATAAACCAGATCTCCGCCTCCCTTCAGTCTCGACAGGCAGCACTGCAGTCCAGTCTGACCGAGCGTCGAGATGCCCTGCTTGGGATCAGCGAATACAACCGCAGTCTGGCCTCTGACCTGGATGGTCTGCAGATCGATGCAGACTTCAGCAAGGCAGGCATTCCAGGACCGGACTGCGCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020823 True 945 mRNA 0.57 7 34445279 34450197

Neighbor

gene id symbol gene type direction distance location
AMCG00020818 NA coding upstream 18430 34420834 ~ 34426849 (+)
AMCG00020816 NA coding upstream 26612 34413614 ~ 34418667 (+)
AMCG00020817 NA coding upstream 43155 34393701 ~ 34402124 (+)
AMCG00020814 NA coding upstream 88142 34342691 ~ 34357137 (+)
AMCG00020808 mthfd2,LOC106580352,LOC107728122 coding upstream 206999 34233825 ~ 34238280 (+)
AMCG00020825 NA coding downstream 331 34450528 ~ 34451727 (+)
AMCG00020824 NA coding downstream 2014 34452211 ~ 34456901 (+)
AMCG00020819 LOC107597267,LOC107654641,LOC107741205,LOC105890027,LOC107663217 coding downstream 12269 34462466 ~ 34475645 (+)
AMCG00020827 NA coding downstream 31182 34481379 ~ 34493390 (+)
AMCG00020826 NA coding downstream 48089 34498286 ~ 34502202 (+)
G65877 NA non-coding upstream 178179 34239889 ~ 34267100 (+)
G65873 NA non-coding upstream 183350 34222346 ~ 34261929 (+)
G65831 NA non-coding upstream 382684 34062152 ~ 34062595 (+)
G65829 NA non-coding upstream 394242 34049994 ~ 34051037 (+)
G65670 NA non-coding upstream 1563161 32879099 ~ 32882118 (+)
G65954 NA non-coding downstream 62460 34512657 ~ 34512879 (+)
G65956 NA non-coding downstream 63849 34514046 ~ 34515896 (+)
G65962 NA non-coding downstream 76670 34526867 ~ 34527075 (+)
G65978 NA non-coding downstream 226714 34676911 ~ 34732379 (+)
G65994 NA non-coding downstream 296696 34746893 ~ 34748114 (+)
AMCG00020820 NA other upstream 33659 34404534 ~ 34411620 (+)
G65830 tet3,LOC106906237 other upstream 385814 34059111 ~ 34059465 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 484697 33954806 ~ 33960582 (+)
G65705 NA other upstream 1336853 33107873 ~ 33108426 (+)
G65691 NA other upstream 1455834 32946731 ~ 32989445 (+)
G66008 NA other downstream 334015 34784212 ~ 34787474 (+)
G66060 NA other downstream 517647 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 697406 35147603 ~ 35149418 (+)
G66149 NA other downstream 713616 35163813 ~ 35164985 (+)
AMCG00020874 NA other downstream 1296959 35747156 ~ 35750446 (+)

Expression


Co-expression Network