Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020840 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 34878690 ~ 34879805 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020840 | True | 723 | mRNA | 0.66 | 3 | 34878690 | 34879805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020835 | hk2,LOC106585103 | coding | upstream | 13328 | 34850662 ~ 34865362 (+) |
| AMCG00020826 | NA | coding | upstream | 376488 | 34498286 ~ 34502202 (+) |
| AMCG00020827 | NA | coding | upstream | 385300 | 34481379 ~ 34493390 (+) |
| AMCG00020819 | LOC107597267,LOC107654641,LOC107741205,LOC105890027,LOC107663217 | coding | upstream | 403045 | 34462466 ~ 34475645 (+) |
| AMCG00020824 | NA | coding | upstream | 421789 | 34452211 ~ 34456901 (+) |
| AMCG00020842 | NA | coding | downstream | 1686 | 34881491 ~ 34892993 (+) |
| AMCG00020844 | NA | coding | downstream | 40013 | 34919818 ~ 34927630 (+) |
| AMCG00020843 | camk2b1,LOC105905148,LOC102297714 | coding | downstream | 55210 | 34935015 ~ 34936792 (+) |
| AMCG00020841 | camk2b,LOC105889509 | coding | downstream | 84817 | 34964622 ~ 34966485 (+) |
| AMCG00020846 | ogdha,LOC108411168,LOC107691557,LOC107756845 | coding | downstream | 98119 | 34977924 ~ 35005498 (+) |
| G65995 | NA | non-coding | upstream | 128539 | 34749498 ~ 34750151 (+) |
| G65996 | NA | non-coding | upstream | 129347 | 34749127 ~ 34749343 (+) |
| G65994 | NA | non-coding | upstream | 130576 | 34746893 ~ 34748114 (+) |
| G65978 | NA | non-coding | upstream | 146311 | 34676911 ~ 34732379 (+) |
| G65962 | NA | non-coding | upstream | 351615 | 34526867 ~ 34527075 (+) |
| G66072 | NA | non-coding | downstream | 145198 | 35025003 ~ 35026229 (+) |
| G66151 | NA | non-coding | downstream | 287263 | 35167068 ~ 35170275 (+) |
| G66231 | NA | non-coding | downstream | 553463 | 35433268 ~ 35433558 (+) |
| G66258 | NA | non-coding | downstream | 673098 | 35552903 ~ 35553230 (+) |
| G66290 | NA | non-coding | downstream | 836240 | 35716045 ~ 35716249 (+) |
| G66008 | NA | other | upstream | 91216 | 34784212 ~ 34787474 (+) |
| AMCG00020820 | NA | other | upstream | 467070 | 34404534 ~ 34411620 (+) |
| G65830 | tet3,LOC106906237 | other | upstream | 819225 | 34059111 ~ 34059465 (+) |
| AMCG00020796 | tmem230a,LOC106565272,LOC106579885 | other | upstream | 918108 | 33954806 ~ 33960582 (+) |
| G65705 | NA | other | upstream | 1770264 | 33107873 ~ 33108426 (+) |
| G66060 | NA | other | downstream | 88039 | 34967844 ~ 35008322 (+) |
| AMCG00020855 | NA | other | downstream | 267798 | 35147603 ~ 35149418 (+) |
| G66149 | NA | other | downstream | 284008 | 35163813 ~ 35164985 (+) |
| AMCG00020874 | NA | other | downstream | 867351 | 35747156 ~ 35750446 (+) |
| G66362 | NA | other | downstream | 987588 | 35867393 ~ 35908402 (+) |
