Gene
RNA
| Item | Value |
|---|---|
| gene id | G59557 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 2583694 ~ 2634130 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU74467 | True | 427 | lncRNA | 0.48 | 2 | 2583694 | 2634130 |
| TU74468 | False | 400 | lncRNA | 0.47 | 2 | 2583694 | 2588069 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019902 | NA | coding | upstream | 11977 | 2567816 ~ 2571717 (+) |
| AMCG00019903 | NA | coding | upstream | 19296 | 2562954 ~ 2564398 (+) |
| AMCG00019901 | ass1 | coding | upstream | 38945 | 2522528 ~ 2544749 (+) |
| AMCG00019900 | surf4,LOC103376134,LOC105890423,LOC101465012 | coding | upstream | 74037 | 2497948 ~ 2509657 (+) |
| AMCG00019895 | NA | coding | upstream | 94750 | 2484957 ~ 2488944 (+) |
| AMCG00019905 | prdm12b,LOC107688643,LOC105030201,LOC106587007,LOC107731029,LOC108423597 | coding | downstream | 16807 | 2650937 ~ 2656033 (+) |
| AMCG00019904 | exosc2,exos2,LOC106566956 | coding | downstream | 23915 | 2658045 ~ 2663160 (+) |
| AMCG00019907 | NA | coding | downstream | 32575 | 2666705 ~ 2670013 (+) |
| AMCG00019910 | NA | coding | downstream | 108571 | 2742701 ~ 2768063 (+) |
| AMCG00019916 | gsna,LOC107708352,LOC107595697,LOC107556937,LOC107686887 | coding | downstream | 156643 | 2790773 ~ 2810001 (+) |
| G59467 | NA | non-coding | upstream | 402625 | 2180603 ~ 2181069 (+) |
| G59460 | NA | non-coding | upstream | 416254 | 2164521 ~ 2167440 (+) |
| G59459 | NA | non-coding | upstream | 420090 | 2161935 ~ 2163604 (+) |
| G59440 | NA | non-coding | upstream | 548900 | 2034561 ~ 2034794 (+) |
| G59425 | NA | non-coding | upstream | 786553 | 1796926 ~ 1797141 (+) |
| G59578 | NA | non-coding | downstream | 81398 | 2715528 ~ 2716915 (+) |
| G59625 | NA | non-coding | downstream | 153780 | 2787910 ~ 2788239 (+) |
| G59638 | NA | non-coding | downstream | 191461 | 2825591 ~ 2826637 (+) |
| G59646 | NA | non-coding | downstream | 249584 | 2883714 ~ 2885416 (+) |
| G59700 | NA | non-coding | downstream | 397748 | 3031878 ~ 3034341 (+) |
| AMCG00019884 | NA | other | upstream | 1474698 | 1074816 ~ 1108996 (+) |
| G59305 | NA | other | upstream | 2138164 | 441598 ~ 445530 (+) |
| AMCG00019920 | NA | other | downstream | 328378 | 2962508 ~ 2969595 (+) |
| AMCG00019934 | NA | other | downstream | 607178 | 3241308 ~ 3251407 (+) |
| AMCG00019967 | prrc2b | other | downstream | 2189683 | 4823813 ~ 4856929 (+) |
| G60137 | NA | other | downstream | 2721642 | 5355772 ~ 5361863 (+) |
| G60132 | NA | other | downstream | 2724334 | 5358464 ~ 5359365 (+) |
