G59625


Basic Information

Item Value
gene id G59625
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2787910 ~ 2788239 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74548
GtttaacacacacagcaccctGTTTAACACCCAGCAccccatcagtgctcagactgtgcGCAAtcggctgagagaggctggactgagggcttgtaggcctgttgtacgGCAGGTCCTtacagacatcaccggcaacaacgtggcctatgggcacaaacccacctgcgctggacgtgatttcctgcaggACAGGAATGTCGGtgtctgccatggccagcgaagagccggATCTCAaccccattgagcacgtctggggcctgttggatcggagggggagggcgagggccattcccccagaaatgtgcgggaacttgcaagtgccggtggaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko04214 Apoptosis - fly

RNA

RNA id representative length rna type GC content exon number start site end site
TU74548 True 330 lncRNA 0.59 1 2787910 2788239

Neighbor

gene id symbol gene type direction distance location
AMCG00019910 NA coding upstream 19847 2742701 ~ 2768063 (+)
AMCG00019907 NA coding upstream 117897 2666705 ~ 2670013 (+)
AMCG00019904 exosc2,exos2,LOC106566956 coding upstream 124750 2658045 ~ 2663160 (+)
AMCG00019905 prdm12b,LOC107688643,LOC105030201,LOC106587007,LOC107731029,LOC108423597 coding upstream 131877 2650937 ~ 2656033 (+)
AMCG00019906 NA coding upstream 151665 2632245 ~ 2636245 (+)
AMCG00019916 gsna,LOC107708352,LOC107595697,LOC107556937,LOC107686887 coding downstream 2534 2790773 ~ 2810001 (+)
AMCG00019917 NA coding downstream 63970 2852209 ~ 2866964 (+)
AMCG00019915 barhl1b,LOC107708351,LOC107595696,LOC105902520,LOC107556939,LOC100712077 coding downstream 81466 2869705 ~ 2876818 (+)
AMCG00019921 NA coding downstream 122005 2910244 ~ 2918881 (+)
AMCG00019926 NA coding downstream 207625 2995864 ~ 3004905 (+)
G59578 NA non-coding upstream 70995 2715528 ~ 2716915 (+)
G59557 NA non-coding upstream 153780 2583694 ~ 2634130 (+)
G59467 NA non-coding upstream 606841 2180603 ~ 2181069 (+)
G59460 NA non-coding upstream 620470 2164521 ~ 2167440 (+)
G59459 NA non-coding upstream 624306 2161935 ~ 2163604 (+)
G59638 NA non-coding downstream 37352 2825591 ~ 2826637 (+)
G59646 NA non-coding downstream 95475 2883714 ~ 2885416 (+)
G59700 NA non-coding downstream 243639 3031878 ~ 3034341 (+)
G59714 NA non-coding downstream 319561 3107800 ~ 3109882 (+)
G59715 NA non-coding downstream 328279 3116518 ~ 3116819 (+)
AMCG00019884 NA other upstream 1678914 1074816 ~ 1108996 (+)
G59305 NA other upstream 2342380 441598 ~ 445530 (+)
AMCG00019920 NA other downstream 174269 2962508 ~ 2969595 (+)
AMCG00019934 NA other downstream 453069 3241308 ~ 3251407 (+)
AMCG00019967 prrc2b other downstream 2035574 4823813 ~ 4856929 (+)
G60137 NA other downstream 2567533 5355772 ~ 5361863 (+)
G60132 NA other downstream 2570225 5358464 ~ 5359365 (+)

Expression


Co-expression Network