Gene
RNA
| Item | Value |
|---|---|
| gene id | G59800 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 3479780 ~ 3480109 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU74799 | True | 330 | lncRNA | 0.45 | 1 | 3479780 | 3480109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019936 | usp20,LOC106562719 | coding | upstream | 245365 | 3211257 ~ 3234415 (+) |
| AMCG00019937 | med22 | coding | upstream | 272424 | 3201986 ~ 3207356 (+) |
| AMCG00019935 | NA | coding | upstream | 283565 | 3193787 ~ 3196215 (+) |
| AMCG00019931 | endog | coding | upstream | 318589 | 3158597 ~ 3161191 (+) |
| AMCG00019932 | NA | coding | upstream | 322239 | 3149094 ~ 3157541 (+) |
| AMCG00019948 | ttll11,LOC107693816,LOC102779474,LOC107579646 | coding | downstream | 102964 | 3583073 ~ 3598555 (+) |
| AMCG00019951 | NA | coding | downstream | 576386 | 4056495 ~ 4072047 (+) |
| AMCG00019959 | lamc3,LOC107718641,LOC107700933,LOC107757520,LOC107596886,LOC107655895 | coding | downstream | 1044247 | 4524356 ~ 4555905 (+) |
| AMCG00019961 | NA | coding | downstream | 1079197 | 4559306 ~ 4587941 (+) |
| AMCG00019958 | NA | coding | downstream | 1123186 | 4603295 ~ 4621533 (+) |
| G59746 | NA | non-coding | upstream | 279302 | 3199622 ~ 3200478 (+) |
| G59718 | NA | non-coding | upstream | 359591 | 3119812 ~ 3120189 (+) |
| G59717 | tbc1d13,LOC102788004,LOC106562828 | non-coding | upstream | 361871 | 3117522 ~ 3117909 (+) |
| G59716 | NA | non-coding | upstream | 362328 | 3117214 ~ 3117452 (+) |
| G59715 | NA | non-coding | upstream | 362961 | 3116518 ~ 3116819 (+) |
| G59821 | NA | non-coding | downstream | 168220 | 3648329 ~ 3651107 (+) |
| G59835 | NA | non-coding | downstream | 208691 | 3688800 ~ 3689000 (+) |
| G59836 | NA | non-coding | downstream | 210726 | 3690835 ~ 3691175 (+) |
| G59837 | LOC107557202,LOC107674335 | non-coding | downstream | 211636 | 3691745 ~ 3692036 (+) |
| G59838 | NA | non-coding | downstream | 212948 | 3693057 ~ 3693459 (+) |
| AMCG00019934 | NA | other | upstream | 228373 | 3241308 ~ 3251407 (+) |
| AMCG00019920 | NA | other | upstream | 510185 | 2962508 ~ 2969595 (+) |
| AMCG00019884 | NA | other | upstream | 2370784 | 1074816 ~ 1108996 (+) |
| G59305 | NA | other | upstream | 3034250 | 441598 ~ 445530 (+) |
| AMCG00019967 | prrc2b | other | downstream | 1343704 | 4823813 ~ 4856929 (+) |
| G60137 | NA | other | downstream | 1875663 | 5355772 ~ 5361863 (+) |
| G60132 | NA | other | downstream | 1878355 | 5358464 ~ 5359365 (+) |
| AMCG00020001 | NA | other | downstream | 2626885 | 6106994 ~ 6114196 (+) |
| AMCG00020000 | NA | other | downstream | 2702590 | 6182699 ~ 6187889 (+) |
