G59849


Basic Information

Item Value
gene id G59849
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3951130 ~ 3951410 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74862
tacagtgcatctggaaagtattcacagcgcttcactttttccacattttgttatgttacagccttattccaaaatggattacattcattattttcctcaaaattctacaaacaataccccataatgacaaagtgaaagaagtttgtttgaaagctttgcaaatttattaaaaataaaaaacaaaaaaagcacatgtacataagtattcacagcctttgccatgacactcaaaattgagctcaggtgcatcctgtttccactgatcatccttgagatgtttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74862 True 281 lncRNA 0.33 1 3951130 3951410

Neighbor

gene id symbol gene type direction distance location
AMCG00019948 ttll11,LOC107693816,LOC102779474,LOC107579646 coding upstream 352575 3583073 ~ 3598555 (+)
AMCG00019936 usp20,LOC106562719 coding upstream 716715 3211257 ~ 3234415 (+)
AMCG00019937 med22 coding upstream 743774 3201986 ~ 3207356 (+)
AMCG00019935 NA coding upstream 754915 3193787 ~ 3196215 (+)
AMCG00019931 endog coding upstream 789939 3158597 ~ 3161191 (+)
AMCG00019951 NA coding downstream 105085 4056495 ~ 4072047 (+)
AMCG00019959 lamc3,LOC107718641,LOC107700933,LOC107757520,LOC107596886,LOC107655895 coding downstream 572946 4524356 ~ 4555905 (+)
AMCG00019961 NA coding downstream 607896 4559306 ~ 4587941 (+)
AMCG00019958 NA coding downstream 651885 4603295 ~ 4621533 (+)
AMCG00019957 aif1l coding downstream 679631 4631041 ~ 4650566 (+)
G59845 NA non-coding upstream 104700 3845999 ~ 3846430 (+)
G59841 NA non-coding upstream 222433 3728372 ~ 3728697 (+)
G59840 dab2ipa non-coding upstream 227684 3722891 ~ 3723446 (+)
G59838 NA non-coding upstream 257671 3693057 ~ 3693459 (+)
G59837 LOC107557202,LOC107674335 non-coding upstream 259094 3691745 ~ 3692036 (+)
G59857 LOC100136012 non-coding downstream 88105 4039515 ~ 4039920 (+)
G59936 NA non-coding downstream 756154 4707564 ~ 4734675 (+)
G59955 NA non-coding downstream 799055 4750465 ~ 4752896 (+)
G59956 NA non-coding downstream 806875 4758285 ~ 4758647 (+)
G59959 NA non-coding downstream 845164 4796574 ~ 4800283 (+)
AMCG00019934 NA other upstream 699723 3241308 ~ 3251407 (+)
AMCG00019920 NA other upstream 981535 2962508 ~ 2969595 (+)
AMCG00019884 NA other upstream 2842134 1074816 ~ 1108996 (+)
G59305 NA other upstream 3505600 441598 ~ 445530 (+)
AMCG00019967 prrc2b other downstream 872403 4823813 ~ 4856929 (+)
G60137 NA other downstream 1404362 5355772 ~ 5361863 (+)
G60132 NA other downstream 1407054 5358464 ~ 5359365 (+)
AMCG00020001 NA other downstream 2155584 6106994 ~ 6114196 (+)
AMCG00020000 NA other downstream 2231289 6182699 ~ 6187889 (+)

Expression


Co-expression Network