G60215


Basic Information

Item Value
gene id G60215
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 5792469 ~ 5792880 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU75326
gacagaagcaataaaaaagacaaacacaatgctaggatatattgtcaaaagtgtagaattgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactatgtggggacttgatccaattTGACCTGACTTGTCTGACAAAACAATCTGCCAACTTTTGCTGTTTGGTTTgaattttttcattcattcatgatGTTTGATCAATCTGAGAACATCAGGCATGCATATTCACGTATTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75326 True 412 lncRNA 0.42 1 5792469 5792880

Neighbor

gene id symbol gene type direction distance location
AMCG00019991 NA coding upstream 445571 5342576 ~ 5346898 (+)
AMCG00019988 NA coding upstream 459438 5320935 ~ 5333031 (+)
AMCG00019986 NA coding upstream 520276 5238988 ~ 5272193 (+)
AMCG00019979 NA coding upstream 625618 5161959 ~ 5166851 (+)
AMCG00019977 set,LOC105014167,LOC102777863,LOC107083999,LOC100696975 coding upstream 635203 5153144 ~ 5157266 (+)
AMCG00019998 LOC106533851 coding downstream 168341 5961221 ~ 5973472 (+)
AMCG00019999 NA coding downstream 230407 6023287 ~ 6032040 (+)
AMCG00020004 NA coding downstream 334119 6126999 ~ 6127406 (+)
AMCG00020009 NA coding downstream 409128 6202008 ~ 6212464 (+)
AMCG00020008 dnm1a,dnm1,LOC108423695 coding downstream 432069 6224949 ~ 6267200 (+)
G60202 NA non-coding upstream 91629 5700501 ~ 5700840 (+)
G60201 NA non-coding upstream 95616 5696627 ~ 5696853 (+)
G60072 NA non-coding upstream 616690 5174436 ~ 5175779 (+)
G60038 NA non-coding upstream 763622 4992638 ~ 5028847 (+)
G59959 NA non-coding upstream 992186 4796574 ~ 4800283 (+)
G60228 NA non-coding downstream 197350 5990230 ~ 5990491 (+)
G60257 NA non-coding downstream 306596 6099476 ~ 6099901 (+)
G60270 NA non-coding downstream 362067 6154947 ~ 6155199 (+)
G60273 NA non-coding downstream 363913 6156793 ~ 6160571 (+)
G60272 NA non-coding downstream 372233 6165113 ~ 6172480 (+)
G60137 NA other upstream 430606 5355772 ~ 5361863 (+)
G60132 NA other upstream 433104 5358464 ~ 5359365 (+)
AMCG00019967 prrc2b other upstream 935540 4823813 ~ 4856929 (+)
AMCG00019934 NA other upstream 2541062 3241308 ~ 3251407 (+)
AMCG00019920 NA other upstream 2822874 2962508 ~ 2969595 (+)
AMCG00020001 NA other downstream 314114 6106994 ~ 6114196 (+)
AMCG00020000 NA other downstream 389819 6182699 ~ 6187889 (+)
AMCG00020052 NA other downstream 2073720 7866600 ~ 7884548 (+)
AMCG00020053 NA other downstream 2251395 8044275 ~ 8051147 (+)
AMCG00020105 rpl28,rl28 other downstream 3991237 9784117 ~ 9788052 (+)

Expression


Co-expression Network