G60270


Basic Information

Item Value
gene id G60270
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 6154947 ~ 6155199 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU75382
ctgtttccactgatcatccttgagatgtttctacaacttgattggagtccacctgtggtaaattcagttgattggacatgatttggaaaggcacacacctgtctatataaggtcccacagttaacagtgcatgtcagagcacaaaccaagccatgaagtccaaggaattgtctgtagacctctgagacaggattgtatcgaggcacagatctggggaagggtacagaaaaatgtctgcagcattgaaggtccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75382 True 253 lncRNA 0.45 1 6154947 6155199

Neighbor

gene id symbol gene type direction distance location
AMCG00020004 NA coding upstream 27541 6126999 ~ 6127406 (+)
AMCG00019999 NA coding upstream 122907 6023287 ~ 6032040 (+)
AMCG00019998 LOC106533851 coding upstream 181475 5961221 ~ 5973472 (+)
AMCG00019991 NA coding upstream 808049 5342576 ~ 5346898 (+)
AMCG00019988 NA coding upstream 821916 5320935 ~ 5333031 (+)
AMCG00020009 NA coding downstream 46809 6202008 ~ 6212464 (+)
AMCG00020008 dnm1a,dnm1,LOC108423695 coding downstream 69750 6224949 ~ 6267200 (+)
AMCG00020010 NA coding downstream 125324 6280523 ~ 6291842 (+)
AMCG00020007 hspa5 coding downstream 183331 6338530 ~ 6341784 (+)
AMCG00020006 ppp6c,Ppp6c,LOC102783418,LOC102313764,LOC106570422,LOC107587376,LOC100701794,LOC102784428 coding downstream 193388 6348587 ~ 6358927 (+)
G60257 NA non-coding upstream 55046 6099476 ~ 6099901 (+)
G60228 NA non-coding upstream 164456 5990230 ~ 5990491 (+)
G60215 NA non-coding upstream 362067 5792469 ~ 5792880 (+)
G60202 NA non-coding upstream 454107 5700501 ~ 5700840 (+)
G60201 NA non-coding upstream 458094 5696627 ~ 5696853 (+)
G60273 NA non-coding downstream 1594 6156793 ~ 6160571 (+)
G60272 NA non-coding downstream 9914 6165113 ~ 6172480 (+)
G60276 NA non-coding downstream 23346 6178545 ~ 6179635 (+)
G60324 NA non-coding downstream 204645 6359844 ~ 6382808 (+)
G60354 NA non-coding downstream 327635 6482834 ~ 6483995 (+)
AMCG00020001 NA other upstream 40751 6106994 ~ 6114196 (+)
G60137 NA other upstream 793084 5355772 ~ 5361863 (+)
G60132 NA other upstream 795582 5358464 ~ 5359365 (+)
AMCG00019967 prrc2b other upstream 1298018 4823813 ~ 4856929 (+)
AMCG00019934 NA other upstream 2903540 3241308 ~ 3251407 (+)
AMCG00020000 NA other downstream 27500 6182699 ~ 6187889 (+)
AMCG00020052 NA other downstream 1711401 7866600 ~ 7884548 (+)
AMCG00020053 NA other downstream 1889076 8044275 ~ 8051147 (+)
AMCG00020105 rpl28,rl28 other downstream 3628918 9784117 ~ 9788052 (+)
AMCG00020122 urm1 other downstream 4325335 10480534 ~ 10499506 (+)

Expression


Co-expression Network