G61064 (LOC103376870)


Basic Information

Item Value
gene id G61064
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10277466 ~ 10346391 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76395
acgagtggttacttcagtcaaagttgctcttctatcagcttgaatcagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttgattagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatgttgttCAGCAAATTGAGCAGCTAAACTTGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76395 True 455 lncRNA 0.44 2 10277466 10346391

Neighbor

gene id symbol gene type direction distance location
AMCG00020116 rabgap1 coding upstream 72911 10170750 ~ 10204555 (+)
AMCG00020114 NA coding upstream 124191 10152226 ~ 10153275 (+)
AMCG00020115 rabgap1,LOC107686418,LOC107744072,LOC107713323 coding upstream 135022 10107365 ~ 10142444 (+)
AMCG00020113 NA coding upstream 190956 10064690 ~ 10086510 (+)
AMCG00020111 NA coding upstream 237408 10038760 ~ 10040058 (+)
AMCG00020119 NA coding downstream 107636 10454027 ~ 10467852 (+)
AMCG00020118 NA coding downstream 122995 10469386 ~ 10477659 (+)
AMCG00020121 cercam coding downstream 174390 10520781 ~ 10531263 (+)
AMCG00020120 NA coding downstream 186322 10532713 ~ 10538018 (+)
AMCG00020131 NA coding downstream 195386 10541777 ~ 10544364 (+)
G60888 NA non-coding upstream 853907 9423337 ~ 9423559 (+)
G60886 NA non-coding upstream 869449 9407657 ~ 9408017 (+)
G60836 NA non-coding upstream 1027652 9249600 ~ 9249814 (+)
G60753 NA non-coding upstream 1391010 8886187 ~ 8886456 (+)
G60729 NA non-coding upstream 1467597 8807002 ~ 8809869 (+)
G61095 NA non-coding downstream 160008 10506399 ~ 10507213 (+)
G61153 LOC103469607,LOC104930867,LOC103356464 non-coding downstream 435375 10781766 ~ 10783898 (+)
G61205 NA non-coding downstream 662025 11008416 ~ 11011745 (+)
G61249 mvb12b,LOC104934585,LOC105922272,LOC103362447 non-coding downstream 1147235 11493626 ~ 11521381 (+)
G61329 NA non-coding downstream 1655309 12001700 ~ 12003127 (+)
AMCG00020105 rpl28,rl28 other upstream 489414 9784117 ~ 9788052 (+)
AMCG00020053 NA other upstream 2226319 8044275 ~ 8051147 (+)
AMCG00020052 NA other upstream 2392918 7866600 ~ 7884548 (+)
AMCG00020000 NA other upstream 4089577 6182699 ~ 6187889 (+)
AMCG00020001 NA other upstream 4163270 6106994 ~ 6114196 (+)
AMCG00020122 urm1 other downstream 134143 10480534 ~ 10499506 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other downstream 392111 10738502 ~ 10755375 (+)
AMCG00020134 rabl6 other downstream 599201 10945592 ~ 10969598 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other downstream 927633 11274024 ~ 11300032 (+)
AMCG00020171 rpl12 other downstream 2062571 12408962 ~ 12414951 (+)

Expression


Co-expression Network