Gene
RNA
| Item | Value |
|---|---|
| gene id | G61095 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 10506399 ~ 10507213 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0021591 | ventricular system development | biological_process |
| GO:0021592 | fourth ventricle development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU76442 | True | 815 | lncRNA | 0.30 | 1 | 10506399 | 10507213 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020118 | NA | coding | upstream | 28740 | 10469386 ~ 10477659 (+) |
| AMCG00020119 | NA | coding | upstream | 38547 | 10454027 ~ 10467852 (+) |
| AMCG00020116 | rabgap1 | coding | upstream | 301844 | 10170750 ~ 10204555 (+) |
| AMCG00020114 | NA | coding | upstream | 353124 | 10152226 ~ 10153275 (+) |
| AMCG00020115 | rabgap1,LOC107686418,LOC107744072,LOC107713323 | coding | upstream | 363955 | 10107365 ~ 10142444 (+) |
| AMCG00020121 | cercam | coding | downstream | 13568 | 10520781 ~ 10531263 (+) |
| AMCG00020120 | NA | coding | downstream | 25500 | 10532713 ~ 10538018 (+) |
| AMCG00020131 | NA | coding | downstream | 34564 | 10541777 ~ 10544364 (+) |
| AMCG00020128 | sardh | coding | downstream | 52457 | 10559670 ~ 10596696 (+) |
| AMCG00020127 | sardh,LOC107713264 | coding | downstream | 100590 | 10607803 ~ 10628137 (+) |
| G61064 | LOC103376870 | non-coding | upstream | 160008 | 10277466 ~ 10346391 (+) |
| G60888 | NA | non-coding | upstream | 1082840 | 9423337 ~ 9423559 (+) |
| G60886 | NA | non-coding | upstream | 1098382 | 9407657 ~ 9408017 (+) |
| G60836 | NA | non-coding | upstream | 1256585 | 9249600 ~ 9249814 (+) |
| G60753 | NA | non-coding | upstream | 1619943 | 8886187 ~ 8886456 (+) |
| G61153 | LOC103469607,LOC104930867,LOC103356464 | non-coding | downstream | 274553 | 10781766 ~ 10783898 (+) |
| G61205 | NA | non-coding | downstream | 501203 | 11008416 ~ 11011745 (+) |
| G61249 | mvb12b,LOC104934585,LOC105922272,LOC103362447 | non-coding | downstream | 986413 | 11493626 ~ 11521381 (+) |
| G61329 | NA | non-coding | downstream | 1494487 | 12001700 ~ 12003127 (+) |
| G61331 | NA | non-coding | downstream | 1501579 | 12008792 ~ 12009100 (+) |
| AMCG00020122 | urm1 | other | upstream | 6893 | 10480534 ~ 10499506 (+) |
| AMCG00020105 | rpl28,rl28 | other | upstream | 718347 | 9784117 ~ 9788052 (+) |
| AMCG00020053 | NA | other | upstream | 2455252 | 8044275 ~ 8051147 (+) |
| AMCG00020052 | NA | other | upstream | 2621851 | 7866600 ~ 7884548 (+) |
| AMCG00020000 | NA | other | upstream | 4318510 | 6182699 ~ 6187889 (+) |
| AMCG00020129 | tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 | other | downstream | 231289 | 10738502 ~ 10755375 (+) |
| AMCG00020134 | rabl6 | other | downstream | 438379 | 10945592 ~ 10969598 (+) |
| AMCG00020143 | pbx3,LOC107669256,LOC108434408 | other | downstream | 766811 | 11274024 ~ 11300032 (+) |
| AMCG00020171 | rpl12 | other | downstream | 1901749 | 12408962 ~ 12414951 (+) |
| AMCG00020177 | NA | other | downstream | 2012551 | 12519764 ~ 12542261 (+) |
