G61153 (LOC103469607,LOC104930867,LOC103356464)


Basic Information

Item Value
gene id G61153
gene name LOC103469607,LOC104930867,LOC103356464
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10781766 ~ 10783898 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76518
ttttttttaacaaagtttgttttattgtaataagGGTTACAGAGAAACGtctgtttttgttcagttaaaaaaaagtacaatttacacaggtattCAATTTCAACAGTGGTATCGCAAGCCCTCTTTTAGTGATACTTTTCTCGTTTTAACAGTTCACAGAGCTATGCatactgtttcttttttcattacaacaacaactactGGAAAACTCAGAGAAAGAGGTGTGctctgtttttatctttttttttaatgggcaAAACAAAATTccccttttttaaaaacatacagggTGATACATTAGcatcaaaaacattttacagggtGCGTTTCTTGTATGTACCGTACTTCAAAGTAATCTTTCTTTCCATCTTCTATTTGTTCATTagattattagtttttttttttttcatgttttccaaaAAAGTAATCACTGACTTTATAATATACTGAATAACAGGTCCTGCCTTAGCTTCATAGTAGaaataaatcttaaaacaaaaaaacgcagCTGTCTATTTCCCAGGGCCTATAACAGGGTTCGTGACGAATGACCATCCTAGGAATAATTCTAGCACCGTAGCGTGATGTCATGTGACTGAACGGCTTTTGTGTCATATTGAATTTGCCTGACTTGTTTAAATATACCGTGCTTGGAAATATTTGGACAGCTTATCGGCTGCAGTGGTTAAAAATTTACACTTTCCCTCTTgacattattttacttaattccCCTGATGAAGTGAGGTGGAGAGAAGAATGATACAGGGGTCGGGGAGGGATGGTGTGGGTGAGGatgagcagaaaacaaacaaacaatcaacaacaacaacacacatatAGCCCTAGTCCCTAAGATTTAACTCATGAGTTATcccaaacatattttttaaaataaaccttcacacacatacagttgTTATTTAACTATTAGAAACCAGAACCGTTTTCTTAAGTCTCAGTAGCCGATGCCCTATAAGGAGATTTTGCATATCAAAtcttattttaagatttaaacgGGGTATTtagaaaaatcaaaataaaagctAAACTGCAGCATGAGTTCAAGCTTTGCAAACAGGGAGTAAAACAACATACAAtcagtaaacaatataaaaaaataagtaaactacTGTGACTGGAGATGACAccgaaaggaaaagaaaatgcaaaggaaaaacaattcaaacaaataaaaaattatataaaaaagtcaaacacaTATGTATCCCCCCAACTAGAACTTTCCTATGAATTTAAGTTACAGATAAAtcttttgttgattttttgtttttgttttttaaacacttttcaaGCAGAAAATGTTAtctttggtgtgtgtgtctggtggGGTAGGGGCTTCTAGATGTTAACTCTTCATAATTAAGGGTAACTGCAGTGCTTTAGCATTGTCAACATACATTCTGCACAAAAAGGTCTGCGGTGCCAGGACAGGGGCAGATAGGGGGGATGGGACAGATAGTGAGTGCTGGGCTGTTGGCAGTGGCTTTGGTAGCTGCAGGACTTGGTTGGGACAAGACCGGACTGGAATGGAGGGACAGAGGAgaagggatgggggggggggctagTTGGGTTCATCTTTATGATCTTTTCCTCCTTCCTTCAAGGTTTCTGAAGTTGGACGGTCTGATTTTCATCTCAGCGAACTCAATGGAATGCTCGTGACCCTTCCAATGGAACCAGTTGACACCCTTGGAGGAGAAAGGAAGACGAGGGAAACTAAAGAGCTCTCTTACCTTGCTGTGGCTGTTGTCGTTGTATCTGCCCATGAGGTTGACGCGGTGGCAGTTCTTGTACCAGAAGGCACCCTTGTAGGACAGAGCGCAGTTGGTGACAGCGATGTCATTGTCGTTATCATAGGTGGAGAAGGGGCGGCCATGGTGATAAGTCATGGAGTCAcctgggagggaggggagggggttaGAGAgtggacattattattattattaatat

Function

NR:

description
PREDICTED: tenascin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76518 True 1971 lncRNA 0.39 2 10781766 10783898

Neighbor

gene id symbol gene type direction distance location
AMCG00020126 LOC107597661 coding upstream 10251 10756020 ~ 10771515 (+)
AMCG00020130 NA coding upstream 84758 10696538 ~ 10697008 (+)
AMCG00020127 sardh,LOC107713264 coding upstream 153629 10607803 ~ 10628137 (+)
AMCG00020128 sardh coding upstream 185070 10559670 ~ 10596696 (+)
AMCG00020131 NA coding upstream 237402 10541777 ~ 10544364 (+)
AMCG00020138 NA coding downstream 221035 11004933 ~ 11008268 (+)
AMCG00020137 gapvd1 coding downstream 243763 11027661 ~ 11063288 (+)
AMCG00020142 pbx3b,LOC107669256,LOC107550583,LOC107555108 coding downstream 419951 11203849 ~ 11205492 (+)
AMCG00020145 mvb12ba,LOC102781577,LOC107654329 coding downstream 688634 11472532 ~ 11494336 (+)
AMCG00020144 mvb12b,LOC101173957,LOC104934585,LOC105922272,LOC103362447 coding downstream 722692 11506590 ~ 11521389 (+)
G61095 NA non-coding upstream 274553 10506399 ~ 10507213 (+)
G61064 LOC103376870 non-coding upstream 435375 10277466 ~ 10346391 (+)
G60888 NA non-coding upstream 1358207 9423337 ~ 9423559 (+)
G60886 NA non-coding upstream 1373749 9407657 ~ 9408017 (+)
G60836 NA non-coding upstream 1531952 9249600 ~ 9249814 (+)
G61205 NA non-coding downstream 224518 11008416 ~ 11011745 (+)
G61249 mvb12b,LOC104934585,LOC105922272,LOC103362447 non-coding downstream 709728 11493626 ~ 11521381 (+)
G61329 NA non-coding downstream 1217802 12001700 ~ 12003127 (+)
G61331 NA non-coding downstream 1224894 12008792 ~ 12009100 (+)
G61332 NA non-coding downstream 1227763 12011661 ~ 12011876 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other upstream 26391 10738502 ~ 10755375 (+)
AMCG00020122 urm1 other upstream 282260 10480534 ~ 10499506 (+)
AMCG00020105 rpl28,rl28 other upstream 993714 9784117 ~ 9788052 (+)
AMCG00020053 NA other upstream 2730619 8044275 ~ 8051147 (+)
AMCG00020052 NA other upstream 2897218 7866600 ~ 7884548 (+)
AMCG00020134 rabl6 other downstream 161694 10945592 ~ 10969598 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other downstream 490126 11274024 ~ 11300032 (+)
AMCG00020171 rpl12 other downstream 1625064 12408962 ~ 12414951 (+)
AMCG00020177 NA other downstream 1735866 12519764 ~ 12542261 (+)
G61491 NA other downstream 1831894 12615792 ~ 12619817 (+)

Expression


Co-expression Network