G61332


Basic Information

Item Value
gene id G61332
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12011661 ~ 12011876 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76735
CTCCGTCAACTGCCCAATAACCttattattaactttaataCCATAAGTAAGAAACCTGAGCTTTTCTTGAATGAGAAGTttagtcttatttatttgtgagttgtttttttacaattgaGTTTTCCAATTCTGTGGCACACCTGTTCATACTTGGTGGCTTATCCAATGTGCTGTGATACACtagtttgaaaacattgcattcaAGTACTATACCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76735 True 216 lncRNA 0.34 1 12011661 12011876

Neighbor

gene id symbol gene type direction distance location
AMCG00020156 NA coding upstream 16550 11992192 ~ 11995111 (+)
AMCG00020154 NA coding upstream 67261 11943279 ~ 11944400 (+)
AMCG00020152 ralgps1,LOC105905312,LOC108412534,LOC107727327 coding upstream 88031 11880082 ~ 11923630 (+)
AMCG00020150 ralgps1,LOC108412534,LOC107723240 coding upstream 199819 11768917 ~ 11811842 (+)
AMCG00020149 NA coding upstream 296561 11713547 ~ 11715100 (+)
AMCG00020157 NA coding downstream 145665 12157541 ~ 12172006 (+)
AMCG00020163 ptpa,LOC102782294 coding downstream 173958 12185834 ~ 12198647 (+)
AMCG00020165 NA coding downstream 188252 12200128 ~ 12202687 (+)
AMCG00020166 NA coding downstream 356897 12368773 ~ 12371712 (+)
AMCG00020172 NA coding downstream 369937 12381813 ~ 12395040 (+)
G61331 NA non-coding upstream 2561 12008792 ~ 12009100 (+)
G61329 NA non-coding upstream 8534 12001700 ~ 12003127 (+)
G61249 mvb12b,LOC104934585,LOC105922272,LOC103362447 non-coding upstream 490280 11493626 ~ 11521381 (+)
G61205 NA non-coding upstream 999916 11008416 ~ 11011745 (+)
G61153 LOC103469607,LOC104930867,LOC103356464 non-coding upstream 1227763 10781766 ~ 10783898 (+)
G61333 NA non-coding downstream 84 12011960 ~ 12012407 (+)
G61335 NA non-coding downstream 3822 12015698 ~ 12016151 (+)
G61336 NA non-coding downstream 4620 12016496 ~ 12016747 (+)
G61338 NA non-coding downstream 114966 12126842 ~ 12129571 (+)
G61434 NA non-coding downstream 403123 12414999 ~ 12468293 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 711629 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 1042063 10945592 ~ 10969598 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other upstream 1256286 10738502 ~ 10755375 (+)
AMCG00020122 urm1 other upstream 1512155 10480534 ~ 10499506 (+)
AMCG00020105 rpl28,rl28 other upstream 2223609 9784117 ~ 9788052 (+)
AMCG00020171 rpl12 other downstream 397086 12408962 ~ 12414951 (+)
AMCG00020177 NA other downstream 507888 12519764 ~ 12542261 (+)
G61491 NA other downstream 603916 12615792 ~ 12619817 (+)
G61675 NA other downstream 1337801 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 1775138 13787014 ~ 13792944 (+)

Expression


Co-expression Network