G61333


Basic Information

Item Value
gene id G61333
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12011960 ~ 12012407 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76736
GCCACTCCTACCTTGGCAGGTGTTGGCACCTGCAGAGACTGTAAACCCAGGGAGGCAGGAGCAGGAAAAGCCACCCATGACATTATTACAGGAGTGGGAGCAGGGAGTTTGGGCAGCACACTCATCCTCGtctgacagacagaaacacagactcACAAATATAGCATACAGGCAGACATTCTGGACATAGACACAGTCATGGTAGTCAAGTTATGGGGGGTTAGGAATCACAAGAACACATGAAAGAAAATACCTGGATGAAACTGAGCATTAAACTGTGAAGCAAGGGAAGATGTAGGTACAGAACAGAAAGATTCAGTcattatttttagctttttgcACCAGAGCAAACACATTTGCAAGCTACTATCCAGTACTGTATCTATAATTATGACATCTGTCAGTGTCTCAGCATGGACTAACCTGCGCAGTATGAAGCTGAATCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76736 True 448 lncRNA 0.45 1 12011960 12012407

Neighbor

gene id symbol gene type direction distance location
AMCG00020156 NA coding upstream 16849 11992192 ~ 11995111 (+)
AMCG00020154 NA coding upstream 67560 11943279 ~ 11944400 (+)
AMCG00020152 ralgps1,LOC105905312,LOC108412534,LOC107727327 coding upstream 88330 11880082 ~ 11923630 (+)
AMCG00020150 ralgps1,LOC108412534,LOC107723240 coding upstream 200118 11768917 ~ 11811842 (+)
AMCG00020149 NA coding upstream 296860 11713547 ~ 11715100 (+)
AMCG00020157 NA coding downstream 145134 12157541 ~ 12172006 (+)
AMCG00020163 ptpa,LOC102782294 coding downstream 173427 12185834 ~ 12198647 (+)
AMCG00020165 NA coding downstream 187721 12200128 ~ 12202687 (+)
AMCG00020166 NA coding downstream 356366 12368773 ~ 12371712 (+)
AMCG00020172 NA coding downstream 369406 12381813 ~ 12395040 (+)
G61332 NA non-coding upstream 84 12011661 ~ 12011876 (+)
G61331 NA non-coding upstream 2860 12008792 ~ 12009100 (+)
G61329 NA non-coding upstream 8833 12001700 ~ 12003127 (+)
G61249 mvb12b,LOC104934585,LOC105922272,LOC103362447 non-coding upstream 490579 11493626 ~ 11521381 (+)
G61205 NA non-coding upstream 1000215 11008416 ~ 11011745 (+)
G61335 NA non-coding downstream 3291 12015698 ~ 12016151 (+)
G61336 NA non-coding downstream 4089 12016496 ~ 12016747 (+)
G61338 NA non-coding downstream 114435 12126842 ~ 12129571 (+)
G61434 NA non-coding downstream 402592 12414999 ~ 12468293 (+)
G61435 NA non-coding downstream 405403 12417810 ~ 12506599 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 711928 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 1042362 10945592 ~ 10969598 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other upstream 1256585 10738502 ~ 10755375 (+)
AMCG00020122 urm1 other upstream 1512454 10480534 ~ 10499506 (+)
AMCG00020105 rpl28,rl28 other upstream 2223908 9784117 ~ 9788052 (+)
AMCG00020171 rpl12 other downstream 396555 12408962 ~ 12414951 (+)
AMCG00020177 NA other downstream 507357 12519764 ~ 12542261 (+)
G61491 NA other downstream 603385 12615792 ~ 12619817 (+)
G61675 NA other downstream 1337270 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 1774607 13787014 ~ 13792944 (+)

Expression


Co-expression Network