Gene
RNA
| Item | Value |
|---|---|
| gene id | G61336 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 12016496 ~ 12016747 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU76739 | True | 252 | lncRNA | 0.57 | 1 | 12016496 | 12016747 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020156 | NA | coding | upstream | 21385 | 11992192 ~ 11995111 (+) |
| AMCG00020154 | NA | coding | upstream | 72096 | 11943279 ~ 11944400 (+) |
| AMCG00020152 | ralgps1,LOC105905312,LOC108412534,LOC107727327 | coding | upstream | 92866 | 11880082 ~ 11923630 (+) |
| AMCG00020150 | ralgps1,LOC108412534,LOC107723240 | coding | upstream | 204654 | 11768917 ~ 11811842 (+) |
| AMCG00020149 | NA | coding | upstream | 301396 | 11713547 ~ 11715100 (+) |
| AMCG00020157 | NA | coding | downstream | 140794 | 12157541 ~ 12172006 (+) |
| AMCG00020163 | ptpa,LOC102782294 | coding | downstream | 169087 | 12185834 ~ 12198647 (+) |
| AMCG00020165 | NA | coding | downstream | 183381 | 12200128 ~ 12202687 (+) |
| AMCG00020166 | NA | coding | downstream | 352026 | 12368773 ~ 12371712 (+) |
| AMCG00020172 | NA | coding | downstream | 365066 | 12381813 ~ 12395040 (+) |
| G61335 | NA | non-coding | upstream | 345 | 12015698 ~ 12016151 (+) |
| G61333 | NA | non-coding | upstream | 4089 | 12011960 ~ 12012407 (+) |
| G61332 | NA | non-coding | upstream | 4620 | 12011661 ~ 12011876 (+) |
| G61331 | NA | non-coding | upstream | 7396 | 12008792 ~ 12009100 (+) |
| G61329 | NA | non-coding | upstream | 13369 | 12001700 ~ 12003127 (+) |
| G61338 | NA | non-coding | downstream | 110095 | 12126842 ~ 12129571 (+) |
| G61434 | NA | non-coding | downstream | 398252 | 12414999 ~ 12468293 (+) |
| G61435 | NA | non-coding | downstream | 401063 | 12417810 ~ 12506599 (+) |
| G61440 | NA | non-coding | downstream | 467630 | 12484377 ~ 12504599 (+) |
| G61460 | NA | non-coding | downstream | 565514 | 12582261 ~ 12585656 (+) |
| AMCG00020143 | pbx3,LOC107669256,LOC108434408 | other | upstream | 716464 | 11274024 ~ 11300032 (+) |
| AMCG00020134 | rabl6 | other | upstream | 1046898 | 10945592 ~ 10969598 (+) |
| AMCG00020129 | tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 | other | upstream | 1261121 | 10738502 ~ 10755375 (+) |
| AMCG00020122 | urm1 | other | upstream | 1516990 | 10480534 ~ 10499506 (+) |
| AMCG00020105 | rpl28,rl28 | other | upstream | 2228444 | 9784117 ~ 9788052 (+) |
| AMCG00020171 | rpl12 | other | downstream | 392215 | 12408962 ~ 12414951 (+) |
| AMCG00020177 | NA | other | downstream | 503017 | 12519764 ~ 12542261 (+) |
| G61491 | NA | other | downstream | 599045 | 12615792 ~ 12619817 (+) |
| G61675 | NA | other | downstream | 1332930 | 13349677 ~ 13350712 (+) |
| AMCG00020245 | LOC107746475,LOC107567702,LOC107595988 | other | downstream | 1770267 | 13787014 ~ 13792944 (+) |
