G64013


Basic Information

Item Value
gene id G64013
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 24233642 ~ 24235127 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU80091
CAACTTTagtcttttattattaaaatatacatccaCCTACAAATCTGCAGCTCTCTCTATAAAAATGATCACATCTGTGTTGGCAAAATACATCAACtcaaaaacatgtacaaatgaCCATACACTTAAAACACTTCCATAGTTTTAGTTTTCTGCATCAGGACAAACAATACCTATATTTCAACCTGACAGTCTCCTTCTAATGAAGgtcaaaatgtcattatttggCCAGATGTAGATTTCAAATTTGGAATGGTAAACTGTCcttgtttattaaatgtttgaaaatttaattataatgaataaggAAGAATTGTCACAGCATTTGAGAGATTTTATTGTCTCCCTGATACAGAATGGGAAATCATGGAAGAACAACATACAGGCTAAGCactcttcttttgtttttactggtAATGGTCCATACTGGAGGATACAGTCATTGCACCCTGCTGAAAAAGGAAGTTCCACTCATTTCAGAATAAGAACCATTAATAACCACCCCTAGACATAAAATAGTCAGCTTGTCAACCACTTCAAGTGTAATTCCATTAATCTTAGTGTAATTCTTacatcttCATATTAATCTGAATTTTTTCTTTGGCAAATAATTgttggttattattatataatttggtATAGACGGTACCACTCCTGACTTTCTACACAACTTGGACTGCTGGTTTTACAGGCTGAACTTAGTCTTCGCTCTAATGCTGCTGTGTGCGTGTTTTGCAATTCAGAATTTGTGAGTCACTATCAGACCTGTCAGAAGGATGCAGCAGctcacaaataataatataaacttgaacatttaaataatctcaTTATGAAGCAACTGTCCACAAATATCTAAAATCATATAGTTGTTACAAtcagaaacatatatatttatacatatattattttgtaagtccTGCCTTACAATGCTTACAACTCCAGTTTACAAATGAAACCAAATAACTGTAATGATGAAAGCCTTCCAGATTTGAATTATTCTTGTTTTCAGGGTTTACATGTACTGCTGTGATCTTCATTACTTTCTCCATTATTTGCCTTCATTTTCTGTCCTTTGTCCATGATCTACTTGCCAGGCAGGTAATTTCATCATAATCAGAACAATTGTCTTGGTCCTATTGTTTGGGAACAGCAGTAAATATCCTCAGTCCATGCATTGCTTGGATCTCATCTTTGAGCGCCTacaaaaagaaggaaagatGCAATTTCACACAGCAGTGTGGGCCATTGAGTTGTACATGTCTCAGAAGAAACACTGCCACAAAGACAACTTTTCATTAACTTAACATTTCTATGTTGACCAAACACTTGtaagttaatttaatacaatagtGTACTGACAACAAATACTgatattacaaatgaaaataaatgttgttcaAATGAAG

Function

GO:

id name namespace
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0022900 electron transport chain biological_process
GO:0006518 peptide metabolic process biological_process
GO:0044444 obsolete cytoplasmic part cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005739 mitochondrion cellular_component
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0003954 NADH dehydrogenase activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0050136 NADH dehydrogenase (quinone) activity molecular_function
GO:0016651 oxidoreductase activity, acting on NAD(P)H molecular_function
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko03010 Ribosome
ko04723 Retrograde endocannabinoid signaling
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU80091 True 1406 lncRNA 0.34 2 24233642 24235127

Neighbor

gene id symbol gene type direction distance location
AMCG00020541 NA coding downstream 36682 24164670 ~ 24196960 (-)
AMCG00020539 NA coding downstream 112904 24091734 ~ 24120738 (-)
AMCG00020540 kars coding downstream 148632 24074873 ~ 24085010 (-)
AMCG00020526 gcsh,LOC107738360 coding downstream 165133 24062892 ~ 24068509 (-)
AMCG00020527 rpl13 coding downstream 178074 24052022 ~ 24055568 (-)
AMCG00020542 NA coding upstream 1001 24236128 ~ 24242643 (-)
AMCG00020538 NA coding upstream 73115 24308242 ~ 24328823 (-)
AMCG00020544 NA coding upstream 116354 24351481 ~ 24370043 (-)
AMCG00020545 zcchc14 coding upstream 166043 24401170 ~ 24401799 (-)
AMCG00020546 NA coding upstream 243374 24478501 ~ 24508437 (-)
G64012 NA non-coding downstream 244 24232716 ~ 24233398 (-)
G63921 NA non-coding downstream 320421 23912862 ~ 23913221 (-)
G63858 NA non-coding downstream 954569 23278792 ~ 23279073 (-)
G63836 NA non-coding downstream 1027721 23202970 ~ 23205921 (-)
G63834 NA non-coding downstream 1039113 23194144 ~ 23194529 (-)
G64028 NA non-coding upstream 69357 24304484 ~ 24304935 (-)
G64120 NA non-coding upstream 450397 24685524 ~ 24687760 (-)
G64126 NA non-coding upstream 466006 24701133 ~ 24701336 (-)
G64170 NA non-coding upstream 619809 24854936 ~ 24856624 (-)
G64186 NA non-coding upstream 710171 24945298 ~ 24946210 (-)
G63819 NA other downstream 1071742 23154692 ~ 23161900 (-)
G63679 NA other downstream 1688953 22543842 ~ 22544689 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other downstream 1766875 22440792 ~ 22466767 (-)
AMCG00020471 NA other downstream 2100905 22130842 ~ 22132737 (-)
G63464 NA other downstream 2921037 21312202 ~ 21312605 (-)
AMCG00020561 NA other upstream 412876 24648003 ~ 24677810 (-)
AMCG00020559 NA other upstream 456766 24691893 ~ 24698947 (-)
AMCG00020560 NA other upstream 518755 24753882 ~ 24776409 (-)
AMCG00020581 NA other upstream 875983 25111110 ~ 25119596 (-)
G64247 NA other upstream 885971 25121098 ~ 25139385 (-)

Expression


Co-expression Network