G64372


Basic Information

Item Value
gene id G64372
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 25550911 ~ 25553320 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU80525
TAAGGTCACAAGAGAACAACACTAAGTAGTTTGCTAGCTTCTTTAATATGTGCACTGGGTGCATTCAaccaacaccccccccacacacacacctacacacaaaaTCAAAGAACAGATGAAATAGCATATGGGTTGCTTTTAGACAGCTGTTGattcccctccaccccccaaggttacattttgttgtacaTAAACCCTGCACTGGTTTTACACGGCACCATTTTCCTGTCATCAACCAAATGCAATTGTAATTTTTGTTAATATGACGAACAGACTGTTATTATCAAGGTTAGCTGAAGCTGGAtgagttttcttttacatatggGTGTTTACAATTCAACTCAAAGTTAACCACCCATTTCCCAGCCGCATTTATCcaagtatttatgtttttaatcttcTCTTATTCAAGTACatggatatttatatattatcttTAAGTCGAAAACAGTGGTTGCTCCCTCCCACTTCCCACATCACATGTGGTTTGTAAACATTACACAAATTATAGAACAATATTTTCAACTTcgattacaaaatgaaaaaaaagtctggTAGAAAAATATTTAAGCTTTTCTCTCATAGTGCATTTTTCatgtactgtaaaaaaaagaaaagaaaaaggaggaaaaaaggcctttggtttcaagacaaaaTTCTGCTGAAAGAGTCGATACAATCACACGTCTGTCAGGGAGCTTGGTCTCAGTTTTCTGTAAATGAAGTGAATAATGACAATAAGTAACATCTCCGATGTGCTGCTCAGGGCCACGATGAAGGGCGCTTGGGAGGCAAAATCCGCCTCGACGCGACGGAAAGACAGCTGCATGACGGCGAGCGCCAGGAGACTGTTCTGCACTCCTATCTCTATACTGACCGTTTTGCGATGAGGCAACGATAGTCTCAAAAGGAAAGCCATCAGATAACCCAAAAGCAGGCCAAAAATGGGTACTGTGACCCCAACTGCTATAATCTGTGGCTTGACGTTGGCAAGTATCGAGGAGCCCATTTGGTACGCCATGAAAATGCCACCCACGATCAGGATGAAACTGAAGGGCCGGATGAGGGTGAGTAGGACCCGGGACACGCTGGGGAACTTGTATTTGATGAACATCCCTGTGGAGATGGGGATGGCGATGAAGAGCAGCGTGACCAGGATCTTGAGGAATGGCACATGAAGGGTTTCATGGACGTTGAGGAGTCGTCCGTAGATAGTGGAGGAGAGAGGCATCATTCCCGTGGCCACCACGGTGGAGATGAGTGTCATGGAGATGGCTAGGGTCACATCTCCGCCCAGGAGCAGGCTGTACAGAtatccccctccaccccccgGAGCTGAACATGTAATCACCAGCCCCAAAGAGAGGGCTTTGGGAAGAGAGGCAATCCTAGACAAGGCATAGGCGTACAAAGGCATCACCACAAACTGGCCAACTATTCCCAGCAGGACCGGGTGGGGCTGTTTCAGCAGCCCCCGCAGCACGTCGATTTCTACCTTGCATCCAAATGCGCATTTGTTGATGAAGATCAGAGGCAGGAGGGCGAAGAGCACGGGGTGCTCGGAGAAGTGGGACAGTCCGCCGGCGGTCAGCAGCGCCGCGTCGTCGCTGGGGGCCACTTTAATCACATAATCCCGCCTCTCTTCTATCAGCATCGGATTGGAGTCCTTGTCCAAATCCAGCAGCTGGATGAGCAGCGGGGCCGAGCCGGCAAACCCGGAGCGGATACTGACCTCGTAACTTCTCACCGGCCCCGCATTCCAGCTGTCGCTGACGTTTAAAACAGACAACACGTCGGTGTCGAGGGATCTTACGCTCACCGTCGGCTTCCAGCTCTCGCTGCCCTGCTCAGTCGCACTGCTGTACCGGCTGGAGATCACGATCACCCCTTCGGTGTTCTCGGGGAATTCAAATTCTACCGAAGTCCCGTCTCCTATGTTAATGTACCTCGTATTGCTTTCATTTATCCGCGCCGTCCAGTTATTACTGCGGCTTTCAGCCAACAAGTCCGTAGCTCCGGTCACCGAGAGCAGCCAGCACAGCGCCAGCACTGTCCTCATCGTCGTGTGTTGGGAGGGCGGGGGGCGCCGCGCAGACACGCCGCTGCTCGGTCCTCCCCAGCGTGCCAGACACGGTGCTCCTCACCGCCGGCAACAACAACTTCGCCGGTCCGCCGCCGCCGGGATCGCAATCACGAAGTCGGGCTGCGCGTCTGAAGTCCGCTGGTTATCCATCtaggcattttattttctccccagGGCCGACGTCACCACTACGGGTTTGAGCAGAAACTCTGATAGTCCATCGATTTGACCTGTTTCCTGCTTTCTCTTCCGGGCAGACAGCACATCTATCACAGCGCTGCTCCCATCTGGTTGCTTGCAGGGTGGATGGGTGCGCTCCCGCTCccg

Function

GO:

id name namespace
GO:0030163 protein catabolic process biological_process
GO:1901565 organonitrogen compound catabolic process biological_process
GO:0009057 macromolecule catabolic process biological_process
GO:0044257 cellular protein catabolic process biological_process
GO:0044265 cellular macromolecule catabolic process biological_process
GO:0051603 proteolysis involved in cellular protein catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80525 True 2410 TUCP 0.51 1 25550911 25553320

Neighbor

gene id symbol gene type direction distance location
AMCG00020596 NA coding upstream 18548 25531176 ~ 25532363 (+)
AMCG00020593 NA coding upstream 58616 25487947 ~ 25492295 (+)
AMCG00020586 wwp2,LOC107740243,LOC108439047 coding upstream 92816 25405634 ~ 25458095 (+)
AMCG00020588 NA coding upstream 158050 25376181 ~ 25392861 (+)
AMCG00020587 wwp2 coding upstream 181176 25366849 ~ 25369735 (+)
AMCG00020600 cdk10 coding downstream 26385 25579705 ~ 25588751 (+)
AMCG00020599 NA coding downstream 47800 25601120 ~ 25610390 (+)
AMCG00020598 znf276,zgc:158366 coding downstream 128296 25681616 ~ 25687176 (+)
AMCG00020609 snta1,LOC107560074,LOC107728410,LOC107667670,LOC107744389 coding downstream 228728 25782048 ~ 25783248 (+)
AMCG00020608 sntb2,LOC106573669,LOC106560900 coding downstream 256846 25810166 ~ 25811675 (+)
G64362 NA non-coding upstream 14864 25535753 ~ 25536047 (+)
G64300 NA non-coding upstream 217229 25332259 ~ 25333682 (+)
G64297 NA non-coding upstream 220353 25330081 ~ 25330558 (+)
G64269 NA non-coding upstream 284704 25263406 ~ 25266207 (+)
G64226 NA non-coding upstream 454014 25096482 ~ 25096897 (+)
G64378 NA non-coding downstream 16070 25569390 ~ 25571762 (+)
G64394 NA non-coding downstream 87273 25640593 ~ 25643374 (+)
G64406 NA non-coding downstream 168613 25721933 ~ 25728334 (+)
G64436 NA non-coding downstream 266071 25819391 ~ 25819782 (+)
G64457 NA non-coding downstream 340830 25894150 ~ 25895525 (+)
AMCG00020585 NA other upstream 78025 25459096 ~ 25472886 (+)
AMCG00020573 NA other upstream 466038 25078142 ~ 25084873 (+)
AMCG00020572 NA other upstream 474221 25062373 ~ 25076690 (+)
G64046 NA other upstream 1068797 24478835 ~ 24482114 (+)
AMCG00020529 LOC107090538 other upstream 1482454 24033037 ~ 24068457 (+)
AMCG00020603 NA other downstream 208815 25762135 ~ 25778982 (+)
AMCG00020621 LOC105904655 other downstream 501967 26055287 ~ 26096957 (+)
G64730 hsbp1,LOC102784925,LOC102222837,LOC103023435 other downstream 1862676 27415996 ~ 27418520 (+)
G64887 NA other downstream 3320310 28873630 ~ 28874072 (+)
G64908 NA other downstream 3455343 29008663 ~ 29009601 (+)

Expression


Co-expression Network