G64457


Basic Information

Item Value
gene id G64457
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 25894150 ~ 25895525 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU80641
GCTTTATTTAGACTTCAACAAGACATCAGCATGGTGCAGTGTATGCTGATCACAGCTACCATTTTACTGCACTCTTCCAGAAGAGTATATAGCTTATTGaagagccattattaatgtttaatataagctgtataatattttacattaatattataaataatgacgtgtgcagacttggcaaattggatttattagtaAAAGGCCAACGAAGCAGTTGTTAAGGATACACCCTTTCTTAATTCCGCTCactgcttctgtttttctatgatAAGAGAAACGGCCTACGAATGtgtatcgcccatgggtttgtccgtttgtggatttcctgtttctcctctcaaagctaaagatgttacctcattgttaagaaaaccacaatatctacagtttgtatgctgtaacaggactaGACATCTGGTTCCATGAGGACCTCCTCCCtcgggaagggcagcctacaggCTTTGcggagcttgcatcttttgaagctttttgatTGGACGAACGGTCACAACATTCAacatcatttttacataaaagatacacttgtgtttgtaaaagttaagtctcactgagggacacttccaagctagcttgattaaagttctatatGTGTTATCTCaatgacttttccagttatttcccAGAAGGGTTcaacacttatatatatatatatatatatatattcaacataCGGATTCCAACATTTACCATCTGATCACATACATCAATAGCAAATAGAAAAGAAACTAGGCATCATGACACCAAATTGAATAGCAGACTGCATTTTACTAAcgcatcttttaaaataaaatgtattttattttaaccctttatACACTACAATGAATATCAAATTATAAGATATTATTGAAATCACATACATCAACCAAAGGCTTCTGTAAACGTTCATTACCAtttcacttaaatatatatatatatatatatatatatatatatatatatatatagaacagtGTCTTGTCttgaacagaaaatatatagttCAAAAGCTTCTGCTGAGATGAGGAAACTAGGCAGGGCAGTAAACCATGTGTAATATtgttaaaacaattatacacaTTTCCATACAACTATCAATTAGCTAAAGAGGTAGGAtagatgtattttcttaattattactTGTTCTCTACTTCAGATATTCCCTCACAGGCTCTCCATGAGACGTACGagtctttgaaaggaaaaaacgGGTGTGACTTCATCCTACAAAAcaagagacacagacagggatTCAGTATTTGTATCTTAAAAGAATATTCTCAGTGTATAAACATTGGAGGAGTAAAAGTCTGGGTTGGAAGTTTTGCTGAGGGAGACACCAGAAAACATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80641 True 1352 lncRNA 0.34 2 25894150 25895525

Neighbor

gene id symbol gene type direction distance location
AMCG00020616 NA coding upstream 9071 25877255 ~ 25885079 (+)
AMCG00020607 vps4a,LOC106939979 coding upstream 32418 25855088 ~ 25861732 (+)
AMCG00020606 sntb2 coding upstream 39586 25839704 ~ 25854564 (+)
AMCG00020608 sntb2,LOC106573669,LOC106560900 coding upstream 82475 25810166 ~ 25811675 (+)
AMCG00020609 snta1,LOC107560074,LOC107728410,LOC107667670,LOC107744389 coding upstream 110902 25782048 ~ 25783248 (+)
AMCG00020611 NA coding downstream 25114 25920639 ~ 25932142 (+)
AMCG00020610 cotl1,LOC107684658,LOC107587015,LOC107559813,LOC107722478,LOC107738394 coding downstream 77008 25972533 ~ 25989687 (+)
AMCG00020617 NA coding downstream 121366 26016891 ~ 26029449 (+)
AMCG00020624 NA coding downstream 325105 26220630 ~ 26230564 (+)
AMCG00020626 NA coding downstream 532401 26427926 ~ 26428763 (+)
G64436 NA non-coding upstream 74368 25819391 ~ 25819782 (+)
G64406 NA non-coding upstream 165816 25721933 ~ 25728334 (+)
G64394 NA non-coding upstream 250776 25640593 ~ 25643374 (+)
G64378 NA non-coding upstream 322388 25569390 ~ 25571762 (+)
G64362 NA non-coding upstream 358103 25535753 ~ 25536047 (+)
G64478 NA non-coding downstream 39380 25934905 ~ 25940113 (+)
G64555 NA non-coding downstream 299688 26195213 ~ 26197405 (+)
G64556 NA non-coding downstream 305539 26201064 ~ 26202040 (+)
G64557 NA non-coding downstream 312059 26207584 ~ 26207838 (+)
G64558 NA non-coding downstream 317355 26212880 ~ 26213093 (+)
AMCG00020603 NA other upstream 115168 25762135 ~ 25778982 (+)
G64372 NA other upstream 340830 25550911 ~ 25553320 (+)
AMCG00020585 NA other upstream 421264 25459096 ~ 25472886 (+)
AMCG00020573 NA other upstream 809277 25078142 ~ 25084873 (+)
AMCG00020572 NA other upstream 817460 25062373 ~ 25076690 (+)
AMCG00020621 LOC105904655 other downstream 159762 26055287 ~ 26096957 (+)
G64730 hsbp1,LOC102784925,LOC102222837,LOC103023435 other downstream 1520471 27415996 ~ 27418520 (+)
G64887 NA other downstream 2978105 28873630 ~ 28874072 (+)
G64908 NA other downstream 3113138 29008663 ~ 29009601 (+)
G64979 NA other downstream 3569039 29464564 ~ 29465712 (+)

Expression


Co-expression Network