G64556


Basic Information

Item Value
gene id G64556
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 26201064 ~ 26202040 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU80768
TCTTGTTGCTGTATCAGATCAAACCATTtcccaattattatttttgtatctgctCTGTGATTACATAGCAGAGAACACCACAACCGGACAGACCCTGCATTACCAATCCGATCAAAACACTCTAAAGCTGCGAGTTGTCTCTTATTGCTTTATCTGTGTTTCTTGAAGAACCAACATCTTCTACTCCAACTCCTTTAAAAACAGTAATGtacatatcaaataaaacaaaatactattaTGAAAGACACCACTATTAAAAAGGAACCTATGAAAAACCCAGATAAAGCTGTAGTAACATTTACATGTCAAACACACGACTATGTATTAAAAAAGCATCACTATGACATTTGTTTAACTAAGCAGTGAAATAAGTAATAAACTTTGCATATTTTAACTATTCCTGACCCCAAAAAAGTCAGTGAATGTCAAACGTATCTCAGACAGGTAAGTGTTAGCAACccctaaagaaaaaaaaacatttatattaacatcCTCCCTACTGTAAACCTCAAAGAAATTGAAATGTGCCTCCTTATCTGCTCACTGACACTGTAACACAAATGACTTATCCGAACTAGGTTGATTTAAGATTGAAGCATTCACCACAGTCACTGCATTACCGTTGTGACATTCCAGAgcaaagcatttttaaacaatgttcttTTTTTGACAAGTAATACTGGTTTTGATGCCTTGCATGTAGCAATATTAGTGTTGGTGACCTTGTTTGCTCCAGGCAGGTGAAGGTGGTGATGCACTGGCTTCTTGCAGCCTCGGCCCTGGGTCCCAGCTCCTATGTGGGGGGCACTCGGATGCGAAACAGAccctgctggagctggagccgGAAGAGCTTGCAGTTGGCAATGCGCAGCGCAGCACAGCCAGTGCGCCGCAGGTCCGAGGGCAGCAGCGGCTTGGTCCTGTGCCAGGTGCCCGTGCTTCTCTTGAACTCCCGCACATAATCATAGCTGGTACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80768 True 977 lncRNA 0.42 1 26201064 26202040

Neighbor

gene id symbol gene type direction distance location
AMCG00020617 NA coding upstream 171615 26016891 ~ 26029449 (+)
AMCG00020610 cotl1,LOC107684658,LOC107587015,LOC107559813,LOC107722478,LOC107738394 coding upstream 211377 25972533 ~ 25989687 (+)
AMCG00020611 NA coding upstream 268922 25920639 ~ 25932142 (+)
AMCG00020616 NA coding upstream 315985 25877255 ~ 25885079 (+)
AMCG00020607 vps4a,LOC106939979 coding upstream 339332 25855088 ~ 25861732 (+)
AMCG00020624 NA coding downstream 18590 26220630 ~ 26230564 (+)
AMCG00020626 NA coding downstream 225886 26427926 ~ 26428763 (+)
AMCG00020629 NA coding downstream 240335 26442375 ~ 26471185 (+)
AMCG00020630 banp coding downstream 287266 26489306 ~ 26507324 (+)
AMCG00020631 NA coding downstream 689577 26891617 ~ 26904288 (+)
G64555 NA non-coding upstream 3659 26195213 ~ 26197405 (+)
G64478 NA non-coding upstream 260951 25934905 ~ 25940113 (+)
G64457 NA non-coding upstream 305539 25894150 ~ 25895525 (+)
G64436 NA non-coding upstream 381282 25819391 ~ 25819782 (+)
G64406 NA non-coding upstream 472730 25721933 ~ 25728334 (+)
G64557 NA non-coding downstream 5544 26207584 ~ 26207838 (+)
G64558 NA non-coding downstream 10840 26212880 ~ 26213093 (+)
G64559 NA non-coding downstream 11337 26213377 ~ 26213728 (+)
G64561 NA non-coding downstream 14592 26216632 ~ 26217130 (+)
G64601 NA non-coding downstream 229634 26431674 ~ 26432153 (+)
AMCG00020621 LOC105904655 other upstream 104107 26055287 ~ 26096957 (+)
AMCG00020603 NA other upstream 422082 25762135 ~ 25778982 (+)
G64372 NA other upstream 647744 25550911 ~ 25553320 (+)
AMCG00020585 NA other upstream 728178 25459096 ~ 25472886 (+)
AMCG00020573 NA other upstream 1116191 25078142 ~ 25084873 (+)
G64730 hsbp1,LOC102784925,LOC102222837,LOC103023435 other downstream 1213956 27415996 ~ 27418520 (+)
G64887 NA other downstream 2671590 28873630 ~ 28874072 (+)
G64908 NA other downstream 2806623 29008663 ~ 29009601 (+)
G64979 NA other downstream 3262524 29464564 ~ 29465712 (+)
AMCG00020684 NA other downstream 3302187 29504227 ~ 29575346 (+)

Expression


Co-expression Network