G65178


Basic Information

Item Value
gene id G65178
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31212938 ~ 31217885 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81516
TATGTATGTACATGGAAAGAAATGTACCAAAGTATGTGTTTAAACCCACCATTTTATTTAGCCTTCAATATCCAAAGATTTATGACaccacacacaattacacaaaacacattctaaAAGAAATAACACCAAAGAACTAAAATATCTCCAAACATCCCattgtctgctaagaaacacCAGTTCCTAGTTCTactaattttaaatgcatgaccTTTAGAAGGCAATGTTGTGAGTTCCCAGTTCTAAAAATGATAGTTTTgatctttttaaatacaactactacaacaatgataataatcacAACACACAGCAATTAAAGTACATTTGCTTAAGTAATAATCAGTCCATTTTAAACTAAAGGCAAGGAAAATGGTCTTAGACagcaatatttttattatatatatatttgtttctaataaaatatttctctacagtaaaaatgcatatatacaacAAAGAACATTTGCAGTCTGAAATATCAGTTCTCTGAAAAAgttatatttgcttttaaaataaaacctatttaTTACAAAGTCTTAAATGATATTGGAGGACTGCCTGCTGCTCCTAGAGGAAAATGACAAATTTCAGTTTGAGATCTTACAAACCTTCATTCATCTTCTCAAACGTTGTGTAAAAACATGGGTGTGTACCCAGCTGGTGCCCTCATCAGTGTCTGGAGTGAAATAGGTTGATGGGCTGTTAGCTTAATAAACACTGGAAGTTCTTGAGTTCACTTAGAAGTCttactgaaataaaactaatattttcaTGAACTACTAATTAAGAACATTTCTGAACCATCTGAAATAATGCACTTGGATATGTTTTGCTGGCAATCTATcatacagtttatttgtatttaaattatttaagatATGTATGCTTTAAATGGTTTCTCCATTCTTAGTAGTATTGCAAGAAGATATCCAAGCGGCCACAACATTTATGACCACCACTTACAaagataaaaactgaaaatatgactgtattgtgtgtgtgacttcTTCATTAAGTCCATCAGCTTTAGAGAACTTCTATTGCCGTTCCCTTTCTTCTACTCCAACAGCCTGTACGCATCATCTGTCCTGTCCCAGTGTCCCCTCGTCACTAAAGATCGAGAGACCACATTCATCGCATACTGTTTAGATTAGGAATTAATCGATAAGAACCTGACAAAACCAAAGATGGCTCAATTACAGTGGCAAACCTGCTCATCTTAATCCGTTTTTCACCTCTGTTAATGTACTTaatttttcacaaaaatacaGCACATCATATACACATCTGCATTGTTTAACATTACCATGTGATAGTCAACACACACCTCATACAAATGGAGTTACtgttaagagagaaaaaagccaagtaaaataaaacacaattgtaaATTAGTACACGGTATAGTGGTGAACTACATACCTCAGAAATTATACTTGCTCAGCATGTTTATATGGATATTTACAATTGAAATAACTATTTAGAAAAAGTTAGCTGGGCATTGAATTAACTACCCACTGCTTCAAATGAAGTTGTCTTTTGGTATTTTGAGTTATGTTAAGTTGTCATTTGAGTTATTTTGTAGTTATGCTTTGATACAgcaatatgtttattaaaacaactgcCCTCAGTttatgcactgtgtgttctctACTTGATTGTCATAAAGCTgctggaaaaaagaaacagataacACTCCAGGCACTTTGTAATTGATAATAAAAGTGATTAATCCACTGCACACTCATTTTGTTATAGTGTCAATTTCCTGTAACCTGTTGATTTGAGTTTTAAGAGAATTTACTTCATGTGAAACTACTATGAAACCAAGACtgaatatgcaaaaaaaaaaattttgtttaaatgcagctATAATGTCCAAGAGGCAAACCCTCAATTCTCAGTTCCTGCAGTTAAGATGCCCCTGCAGTGCTGAAGAATGACAGTCTTGAGTTTTTGAGTGGAGTAgctgggagggggaggggttgattaattaaaatgatgggTTTATAATAATCAATGTCATCTGTGTGTTCtcacaatgtgtttatttgaccTATAATTGGCCTGTGCTGGACACTTGCCTTCCTCCTTGATTCAGTGTTGTGCAATGCATCCAAAACGGTATCGCATGAGAGCAAGGATAAATCCaaaaacatcttatttaaaTAACGGTTATAATGGCATCTGGTTGACCCTTATAACAGAACTACTACAGAGAAACAGGCTGCAGAGATGGTGATAATGAAGCATCACAAGCAGACTGGGCCTTCTGTTTGAGCTGAACCTTGGCAGCACTCTGACAGCAGGCTTAGTCAATGGTGAGACACCTCTGTATCTCGCTGCAGGTCCAACACAGCTACTCCTTATCTGTTGATCCACCTGCTGCCACTGGTGCCGTAGGCATTGTAAGGCAACGGGTAGACGCTGGTGGCCTGGTTCATCCAGCCTTGGTCTCCATTCCTCagtctctgctgctgctgctgctcctcgAAGCACCTCAGCAGCTTCCACACCTCGGCCTGGTCGTCGAAGGGGCTGTGTCTGTACTTGGCCCTCAGCCAGCTGCGGAACTGagacaaacacaacagtgaGGGGGCATCGCTCTGCATCCCACCTTCGCACAGGGATGTGTAAGAGAGCTGTGGAAAGTATGGTCTGAGACAGTTCTCCTTTCAGAGAGGACGGAGTGAACGGGACTTTTATCACagcacaacaaaaaacacatccatGTCCAAACACAATGCATGTGTTAATGTAAATCTACTTCTTTGCCTCTGGTGTAACATTGTTTTGGCCTGCTCAAGATAACCTCATGCTTACTCACAGAGTCTTTGCAATTTTGACAAAGGTGATGCCAGATTCCTGCTACACTTTGATCTCCATTACCATAATCATTTCCGGTtttcaaaaagtaattaaatatgaGAGATCATCATTAAAACCCTACTATCTGTGATATATCTGTGTTCCCTTTTTTAATAGTTTACATACCTTTTGAACTCTCCCTGATGTCTAGATACTGTTTATCTGCGCGACATTACTGTTAACAGAATGACGGGTAGCACATAAGAGCACTTTTGCAgctttgtgaaaaaaataaaagaaagaaaatatttttaaatgtcatgttgCGAGGGTTGTGTTGAAGTCATCAGACAAACAGCAGCTgcagtatataaataatactctTGTTCTGGATGACatattaagcattatttcatcAAAGCTTATATTATAAGGCTAACAATAGCTCTCTCACACTGTAAGATCTGGAGTCATACATATACTGAGTAGCTCTGTCTGAAAATGCATCTCTTCATCCAGGGGACTTCCAGCACTGTGTGGTCTGGTTACTTGGGATTTCACTCCCAGCATCCTACTTGTTTGTCATGATCAGTGATTTAAACTGGGTTAATAAGTGGGTGTGCTTCCATATAACCAGCATACTGTTGTCTGCTCTGTTTTATTGGCACACCGCATCTGACAGGTCAAGGATATTTAAAAGACTTCCTAATAATGCCCGGGGGTGTTATTATCTTGTGTGTGCCAGCCCAATAAGCAGAAACTGAGTTTTTAGATCATGTGTATTTGAGGTTTATGTCAAACAAGAATACTTGCTGCTCACCTTGTAAAATGAGATTTACTATTCAGAAATTCACAAATGAAagctatttaaataatataattctaGATGAATTGGGAACTACAATGATAAATTATGAAGAGGACATTTTTCTAAGTTATGCaacctaaaataaacaaactaggAGAgaccaaaaacagaaatacaattaatacgTTATTCACTTATAGTCAAAATATGTCTCATTGAATCCTTATTGAAAAGGAGTTTAATATAGCTTAACTAGATGAAAAGGATCtaggttttaattaaacttttatcCTCATGGAGAGCATTTGGAAGTATCAGCAATTTCAGTTAAAATCAGACATCCTCTGGGAAAACCCTGGCAGGAATTCAACATTCAAAACTTCTCAGTAAAGCTAAAAGATATTTCTTGGCTCTAAGTTAAGGCATTACTAGGAAAAGTGTTTAATCTTTTCCTTCCTCATCAGACATGTGTACAGCAAAGGACAACCACAAACTGGGGCTCAGGTCAACTGGTGACATCAAATGTAGgcaaataatgcataaaaacaggaaataaatattgaatatgtgACACATTTACAGTGCATACAGTGGCTCTAATGTATGTCTGTACCCCTTAATACAAATTATCATTTTGCCCTACTATACACTAGTAAAAGCCAAAGTGAAATTAAGATATTTTCTATGGTTCTGGCACTTCTCTGTCAGATTTTCTGGCAGAATATCTCCAGCTCAGATTTCTCAGAGTTCAAATCACATATGTTCTATAGGATTTTGTTCTGAATATTGCTATGACCATTAAAGGACATTGATTTGGATCATTATACAGCTGTAATGtccatattttacatattttcatttatttgagcCAATAAATGATTGcacacttacatttttttgttacaatgtattaatacatatgAATAAATGTGGAATGTGTAATAATGATGAATATAGCTGTAAGCAGCAACTATCAGTGGCCTAACAAGCATAGCATAGtggtacacacacatataacaaTGTGTAGATGGAGTGGTTTCAAAAGTATATTGCATCATATGTTACACTATTTACATAAGCCACTTTAAACGCATTCGATTTGTTCATATGGTTAGGTAGtcatattgcatttaaatttggAATTTTTACTCTAAACTTCTCCCAAACTGCTTACAAATACCATATGATATTTCATGCATAGTACACAAtaagtttgtatatatatacactcacctaaaggattattaggaacacctgttcaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81516 True 4879 lncRNA 0.36 2 31212938 31217885

Neighbor

gene id symbol gene type direction distance location
AMCG00020705 NA coding downstream 60966 31146087 ~ 31151972 (-)
AMCG00020706 NA coding downstream 69535 31139693 ~ 31143403 (-)
AMCG00020699 NA coding downstream 452855 30758126 ~ 30760083 (-)
AMCG00020693 NA coding downstream 792304 30365020 ~ 30420634 (-)
AMCG00020692 NA coding downstream 1067411 30128219 ~ 30145527 (-)
AMCG00020711 NA coding upstream 208636 31426521 ~ 31432953 (-)
AMCG00020712 NA coding upstream 217743 31435628 ~ 31448649 (-)
AMCG00020717 LOC108428436,LOC106927143,LOC105895635,LOC103149374 coding upstream 301340 31519225 ~ 31543659 (-)
AMCG00020716 NA coding upstream 326683 31544568 ~ 31545686 (-)
AMCG00020719 def8 coding upstream 328488 31546373 ~ 31560989 (-)
G65166 NA non-coding downstream 56673 31152419 ~ 31156265 (-)
G65109 NA non-coding downstream 382396 30830181 ~ 30830542 (-)
G65073 NA non-coding downstream 510765 30700486 ~ 30702173 (-)
G65071 NA non-coding downstream 519571 30693148 ~ 30693367 (-)
G65068 cdyl2,LOC106562298 non-coding downstream 539976 30672745 ~ 30672962 (-)
G65179 NA non-coding upstream 1658 31219543 ~ 31219744 (-)
G65221 gas8,LOC108276428 non-coding upstream 262871 31480756 ~ 31481969 (-)
G65267 NA non-coding upstream 430739 31648624 ~ 31648851 (-)
G65297 NA non-coding upstream 493649 31711534 ~ 31711764 (-)
G65314 NA non-coding upstream 538377 31756262 ~ 31756689 (-)
AMCG00020702 NA other downstream 404092 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 474962 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 681802 30449745 ~ 30531136 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other downstream 1679821 29520191 ~ 29533117 (-)
G65000 NA other downstream 1807302 29381315 ~ 29405636 (-)
AMCG00020713 NA other upstream 147778 31365663 ~ 31412823 (-)
AMCG00020746 NA other upstream 904000 32121885 ~ 32122933 (-)
G65549 NA other upstream 1140353 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 1336975 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 1389977 32607862 ~ 32610708 (-)

Expression


Co-expression Network