G65270


Basic Information

Item Value
gene id G65270
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31657726 ~ 31659455 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81623
GGCGGAGGCAGCTgtattttttgtgctttttcttcctCCTACAAATACCTACAGGGTTGCAGCACGGAAGCATCATATGGgtgaaataacaaaacacaaagcaggaGTAGTCTTGGTCTGAACTGCGacgattttcttttttgattgGACATCTGGATAGCTGGCATGGGGCAGATCGAGTGGGCTATGTGGGCGAATGAACAGGCGCTAGCGGCGGGGCTCATTCTGCTAACCGGCGGCATTGTTGGGGTCGCTGGGCAGTTCAGGGGATGGCAGTTTGCCGCCTACGGAGTGTATCctttcattttaacacaataatcCTGCCAGATGATCTCAAAACAGCTTTTTAGGAGAGAACCTAAGCAACTGTTATAAGTGAGAAGTTCAGTTCTATACACTATAAGTATGTTTTAGTATacttataatatataacatactCATCTCTTGCACCTGGGCTCTTTTCTGAACTATGGTGGTTCAAGCAAAACTGAGATACAGTACAAAAACTGATCTGATCCCTACAAAACTGTTTGGTGACGGTGGTGCATGGTGTTAAATGTGTACTCTTAAGAATAGCACTGCAGGAAGTCACGTAGCTAAATTCTTTGTGAACCTGCTTGGTTGCACTGTTTTGGAAGAAAGTTAATCAAACAAGTTCCTCTTACACTGCACATCTCTGtaaaaactgtatatatatctgCAGATTAAACATTGGACTTTTATAAATCTATGAATGGCCCATAACAATCTGTGTGAGATGAAAGAcgtgcaattaaaataacatcagacTGCTGTATAGGTAGTAAAACTGTCTTGTAGGttacacagaataaacactgcCTGGCAAGATCCTTGATTGTAAAAAGAACGATCATTTTGGGCATTATACGTCCAGGAACGACACTCCTAATTATTGTCGGAGAGTAATNNNNNNNNNNACTGTGagctgttttgtgtcatttaagtattgtataaaaaaacagaGTCGCTGTGGTAAGAACAGTGTATTACCCCAATGTAAAGCATTACTCCATCAACATGTTGAGAGAGAGTGCATCTGTTGTAACATTAAACTCATAATCTAGGTGGTACCCACACCATAATCCCCAAAATATGATGTTAGAATAGTCAGTTTCCCACTGAAAACTAAAGAGTTTCTATTTTTGGACACAGAAGGACAACAAATAATGAGATGAAGTCTGCGGTGAGGTGAAGTACTAACTCAGACAGTTCATGCTTCATTTCTTTGCTGAAAAACAGCTTTATATATTTAGACTCCAGTCCCAGGTGGCTGCAGtgtctgttggtttttgttccagcagCAGCTCCCTA

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG:

id description
ko04662 B cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU81623 True 1332 lncRNA 0.40 2 31657726 31659455

Neighbor

gene id symbol gene type direction distance location
AMCG00020714 NA coding upstream 153772 31496044 ~ 31503954 (+)
AMCG00020710 foxf1 coding upstream 238371 31413525 ~ 31419355 (+)
AMCG00020709 NA coding upstream 424102 31227122 ~ 31233624 (+)
AMCG00020707 LOC106951238 coding upstream 501887 31152401 ~ 31155839 (+)
AMCG00020704 NA coding upstream 526337 31109024 ~ 31131389 (+)
AMCG00020722 NA coding downstream 25674 31685129 ~ 31709788 (+)
AMCG00020723 NA coding downstream 54441 31713896 ~ 31720373 (+)
AMCG00020724 NA coding downstream 61407 31720862 ~ 31723055 (+)
AMCG00020729 wdr59,LOC107686576 coding downstream 66729 31726184 ~ 31753719 (+)
AMCG00020728 cfap20 coding downstream 94857 31754312 ~ 31758498 (+)
G65266 NA non-coding upstream 21397 31635763 ~ 31636329 (+)
G65246 tubb3,LOC107552791,LOC108431516,LOC108272015 non-coding upstream 91367 31564833 ~ 31566359 (+)
G65223 NA non-coding upstream 171824 31485583 ~ 31485902 (+)
G65163 NA non-coding upstream 507965 31146087 ~ 31149761 (+)
G65067 NA non-coding upstream 955569 30700454 ~ 30702157 (+)
G65276 NA non-coding downstream 22659 31682114 ~ 31683154 (+)
G65290 NA non-coding downstream 52090 31711545 ~ 31711765 (+)
G65332 NA non-coding downstream 125362 31784817 ~ 31785133 (+)
G65413 NA non-coding downstream 433516 32092971 ~ 32093171 (+)
G65437 vdac3,LOC107671013,LOC107559564,LOC107754399 non-coding downstream 522907 32182362 ~ 32268201 (+)
AMCG00020715 gas8 other upstream 173256 31459502 ~ 31484470 (+)
AMCG00020708 LOC106562285 other upstream 439886 31162601 ~ 31217840 (+)
G65100 NA other upstream 886799 30767024 ~ 30770927 (+)
AMCG00020695 cdyl2,LOC106562298 other upstream 957472 30686706 ~ 30700254 (+)
AMCG00020697 dynlrb2,LOC106573385,LOC103025073 other upstream 1121162 30533193 ~ 30536564 (+)
G65343 NA other downstream 203928 31863383 ~ 31864706 (+)
AMCG00020742 NA other downstream 434569 32094024 ~ 32095186 (+)
G65433 LOC106580491,LOC108439670,LOC103398109 other downstream 527159 32186614 ~ 32189381 (+)
AMCG00020748 NA other downstream 614831 32274286 ~ 32280835 (+)
G65590 NA other downstream 933027 32592482 ~ 32594454 (+)

Expression


Co-expression Network