G65276


Basic Information

Item Value
gene id G65276
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31682114 ~ 31683154 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81629
AAATCCCCAATCAGTATACAAAGTAGTGTCAACATTTTTTAtgtacaaaaaatgaaacagaaaataaattagaaaaggcaacttaaaaatcaaaactttatATATTCATAAGGTATTCATCTTTCAGCACACTAATGTTGAAAGGAGGTCCCCACAGCGACAGGCGTCAGCACACAGTTCTGCAGTTCTGTTGAGCAGCATGTCCAACTGGCTTCTGTGTATGAGGCGCCattagggacataattcacccaGTGGTACATACACTACACTGAGACTCTGACACTATATAGAgacacactacatactgaaacACATACACTATAAACTGAGACTCatacactgtatactgagacGTCTTAGTATATAGTGCTTCTTGgcattagtgtgtgtgtctcagtatatagtgcatctcagtatatactATGTCTCAGTAAATAGTATATAGTGCGTCTCAGTAAATAgtagtgtgtctcagtatgtagtgcgtctcagtatatagtgcatctcagtatatagtacGTCTCGGTATgtagtgtgtctcagtatatagtgtgtctcagtatatagtgcgTCTCAGTAAatagtgtgtctcagtatatagtgtgtgcgtctcagtatataatgtgtctcagtatatagtgtgtgcgtctcagtatataatgtgtctctgtatatagtgtgtgtgtctcagtatatagtgcatctcagtatatagtgcgTCTCAGTAAATAGTGCGTCTCAGTAAACAGTATATAgtgtctcagtacatagtgtgtctcagtatataatgtgtctcagtatatagtgtgtgtgtctcagtagaTAGTGTGTCTCTGTATATAGTGCGTCTCAATATATAGTGTcagcgtctcagtatatagtgcgtctcagtatatagtgtcaGCGTCTCAGT

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU81629 True 913 lncRNA 0.38 2 31682114 31683154

Neighbor

gene id symbol gene type direction distance location
AMCG00020714 NA coding upstream 178160 31496044 ~ 31503954 (+)
AMCG00020710 foxf1 coding upstream 262759 31413525 ~ 31419355 (+)
AMCG00020709 NA coding upstream 448490 31227122 ~ 31233624 (+)
AMCG00020707 LOC106951238 coding upstream 526275 31152401 ~ 31155839 (+)
AMCG00020704 NA coding upstream 550725 31109024 ~ 31131389 (+)
AMCG00020722 NA coding downstream 1975 31685129 ~ 31709788 (+)
AMCG00020723 NA coding downstream 30742 31713896 ~ 31720373 (+)
AMCG00020724 NA coding downstream 37708 31720862 ~ 31723055 (+)
AMCG00020729 wdr59,LOC107686576 coding downstream 43030 31726184 ~ 31753719 (+)
AMCG00020728 cfap20 coding downstream 71158 31754312 ~ 31758498 (+)
G65270 NA non-coding upstream 22659 31657726 ~ 31659455 (+)
G65266 NA non-coding upstream 45785 31635763 ~ 31636329 (+)
G65246 tubb3,LOC107552791,LOC108431516,LOC108272015 non-coding upstream 115755 31564833 ~ 31566359 (+)
G65223 NA non-coding upstream 196212 31485583 ~ 31485902 (+)
G65163 NA non-coding upstream 532353 31146087 ~ 31149761 (+)
G65290 NA non-coding downstream 28391 31711545 ~ 31711765 (+)
G65332 NA non-coding downstream 101663 31784817 ~ 31785133 (+)
G65413 NA non-coding downstream 409817 32092971 ~ 32093171 (+)
G65437 vdac3,LOC107671013,LOC107559564,LOC107754399 non-coding downstream 499208 32182362 ~ 32268201 (+)
G65450 NA non-coding downstream 550996 32234150 ~ 32253861 (+)
AMCG00020715 gas8 other upstream 197644 31459502 ~ 31484470 (+)
AMCG00020708 LOC106562285 other upstream 464274 31162601 ~ 31217840 (+)
G65100 NA other upstream 911187 30767024 ~ 30770927 (+)
AMCG00020695 cdyl2,LOC106562298 other upstream 981860 30686706 ~ 30700254 (+)
AMCG00020697 dynlrb2,LOC106573385,LOC103025073 other upstream 1145550 30533193 ~ 30536564 (+)
G65343 NA other downstream 180229 31863383 ~ 31864706 (+)
AMCG00020742 NA other downstream 410870 32094024 ~ 32095186 (+)
G65433 LOC106580491,LOC108439670,LOC103398109 other downstream 503460 32186614 ~ 32189381 (+)
AMCG00020748 NA other downstream 591132 32274286 ~ 32280835 (+)
G65590 NA other downstream 909328 32592482 ~ 32594454 (+)

Expression


Co-expression Network