G65315


Basic Information

Item Value
gene id G65315
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31757451 ~ 31758500 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81682
TagggaaatataatttatttgattctGTTGAAAACTTGTGCAGCATCCctgtatatatgaaaacatgtcaaaacaattgtattaattggtAGACGTTCACCAGCTGGAATCACCCGGTACCCCACCAGACCTGTTCATTGTAATCCATCATAACATCAGCTGACTGGTTTGGCAAGAAATCGTTttctgagattaaaaaaataaataaaataaaaaatggaaccatgtgcattttattcattAGTGTTTCAACACCTAATCTTCTCATATGAGTGTCTTTTCAGTCATTTCTCtacaaaattaaagtaaaaaacatttgcaatgcTTGCATTTTCAAggtaaaaatttaaaataaaaatacaggcTATTTTGgttgattacattttaagttggATATTATAACCAACAGACAATTCTAAGCTATCAAACTATATCAGTACgtttctaaataaatactataatcATGATACAGAACTAAACTTTTCTGGCGTAAAGTGACCCGAGTAAACGCAGTGCGTTTTAAacatcacagacacaaacacatttacttgCAGTGTCTGATGTGGAGCAAGCCTCAACTAATGCTTGTAATTCTActgcaatataaatacaaaaataaaatatattttttttctgaacatataaatatttatttcacatgtatAAATTAGACTAATCTGCAGACCGTGTTCCACACGTTTCTTGATCGAGGTTGTAATTCGTGCAGATGACTGGGGTGGGTTACATGCTCAGTGCTGACGAAGGAAACTGAAAAATCAGTCAGAGAATGCGTATACTCTTCAATAACAAaactaacagaaaataaaggggGAAACATTTCGGATTAGACTTTAATATCCACACAATAGCAGAAGCAAAAACCTGTAGAAAGTATTCTTCGTGATCCTGAAAGTGTTGTGTAACACTATTTCCCCGTCCTCCTCTTCATACCTTGGACTTGTTCTGGACTGGGAGGTACAGTTTGAACTCTGCTGGCAGCTCGTCTTCCGAGTACAGTCGGTCAGAGAAATAAACCCTTCTGATCCGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81682 True 1050 lncRNA 0.35 1 31757451 31758500

Neighbor

gene id symbol gene type direction distance location
AMCG00020727 nob1 coding downstream 22479 31731257 ~ 31734972 (-)
AMCG00020725 nip7 coding downstream 31691 31723181 ~ 31725760 (-)
AMCG00020726 NA coding downstream 86957 31662637 ~ 31670494 (-)
AMCG00020720 tcf25,LOC106562269,LOC106562272 coding downstream 125394 31606288 ~ 31632057 (-)
AMCG00020721 NA coding downstream 162546 31594228 ~ 31594905 (-)
AMCG00020735 NA coding upstream 138826 31897326 ~ 31914451 (-)
AMCG00020739 NA coding upstream 265822 32024322 ~ 32038155 (-)
AMCG00020745 NA coding upstream 312701 32071201 ~ 32083067 (-)
AMCG00020744 wdr45,LOC102779567 coding upstream 346230 32104730 ~ 32109416 (-)
AMCG00020743 NA coding upstream 364891 32123391 ~ 32138907 (-)
G65314 NA non-coding downstream 762 31756262 ~ 31756689 (-)
G65297 NA non-coding downstream 45687 31711534 ~ 31711764 (-)
G65267 NA non-coding downstream 108600 31648624 ~ 31648851 (-)
G65221 gas8,LOC108276428 non-coding downstream 275482 31480756 ~ 31481969 (-)
G65179 NA non-coding downstream 537707 31219543 ~ 31219744 (-)
G65337 NA non-coding upstream 27015 31785515 ~ 31803792 (-)
G65397 NA non-coding upstream 299818 32058318 ~ 32061297 (-)
G65465 NA non-coding upstream 427982 32186482 ~ 32187711 (-)
G65468 NA non-coding upstream 454227 32212727 ~ 32215757 (-)
G65571 NA non-coding upstream 756903 32515403 ~ 32515617 (-)
AMCG00020713 NA other downstream 344628 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 948605 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1019475 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1226315 30449745 ~ 30531136 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other downstream 2224334 29520191 ~ 29533117 (-)
AMCG00020746 NA other upstream 363385 32121885 ~ 32122933 (-)
G65549 NA other upstream 599738 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 796360 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 849362 32607862 ~ 32610708 (-)
G65641 NA other upstream 896634 32655134 ~ 32657019 (-)

Expression


Co-expression Network