G65337


Basic Information

Item Value
gene id G65337
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31785515 ~ 31803792 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81708
NNattaatgagaaattgaacaggtgctcctaataatcctttaggtGGCCCCAGCTGAAGGTTTCTCAGACCTGGCCATGCAAGTGATGACCCCTCCCTCAAATAACTACATGCTGTTCATGATTGTGCCAGGCTTGTGCATCCTCTTGCTGATTGGTCTGCTGCGTGGCTGCATCACCAAGCGCATTTACACACGAACTCAAGGACAGcaaaaGATGAGATACCTCCCCATCAGCAGCTGACGATACACAAGACCACAGACAGCAGCATCAATTAAACGTTTCTGATTTTCATGCTGCTTGTTGGATAAATGACCATTTAACCATTAACCCTTTGAGCAATATGTTCTAAAATGCTCTGCCGTAACTCAGGGAGTAACTGTTTTTGCACATGCTTATAATTAGATTCCTTCAGCGTACATACAGGCATCTGTGGAAGTggcaggggggtggggatgtatataaatatgagtCGGTTAGTTATTTTACACTTGTTTTTAGTTCCAGTAAAGCGCATTAAAGTTCGAATGCCAGTATGTGccatacagagagagagttttATAGAAAATTATTGGttgacaatatgcattttagttggtgttttgattgtgtttttcttcccaaGTTATAGATCTATGTAGGATGTAGAACACTTATTTAGATGTAGGTATTTTTTAGTTCAACATATATAAAACCACTGCCTGCCCTTTTGTTTGGGACTGATCTGTGAATCAGCCCTCGTGTGTCCTGTCTGCACTGCATCTGTGCTTCTGCTGCTCCAAGACTGGGGAGCTAGggcttctttctttccttttactGAAAGTGAGATTGGGTAAATAAATGCAAGCAGGCAAACTCATTCATTAAGGCTAACTGACGTGCTCGTTTGCTCTCTGTACACAGAGCTGACGTACAGgatataaaagcaatacaatagttgtaataatacagtacaaaattacagaagtgcattaccctttctggtgtgtgtgtgtgtgtgcgtgcgtgtacACGTACATTTTCAGGGGTTTCCACATTATCCAAAGCATACCTGTGCAGGAGCTGGTGTATCCTCTGTACCCGTCAGccttccccctcctcccccaggaTGTCTGCTGGCCTTGGCATTGCAGTGGCAGCAAGTTTGTCCAGTCTTCTTTTCAGAGACGGCTGCCTCTACCTCCACACCCTGGGAGACAGATGcctgcaaacaaaataattctgtaTGAATATCAGAAGGTGCTTTCCTCTGTCGGCTTGAAGCACTTTTCCCTGTTTCATGTTCCTTTCATGTGagatacacattatatatattttatttaaaatagtcaTTTGACATCATCCCAAAGATCAGTAAACATTGCTGTGAGGTGACCCTACTAGTTTTATTTCAGAGggaggaatgtgtgtgtgccgTGGGCAGGATGGGTGCCAAATGTGTAATGAGTCTTTGGTTGATTTCTCTCTTCATCGTTGttgtgaattgtattttgatgtaGATTGTGTCAGGAAGGAAGACTTAATTATACCATGCATATTAAGCAAGTTTGTCTTGCTTAATATGCATGGTATAATTAAGTCTTCCTTGTAAGTCTCTTCTTTATTTAAGATTTGACTTTTACATCAGAGCACTGTGTATCAGTGTCTATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81708 True 1649 lncRNA 0.41 3 31785515 31803792

Neighbor

gene id symbol gene type direction distance location
AMCG00020727 nob1 coding downstream 50543 31731257 ~ 31734972 (-)
AMCG00020725 nip7 coding downstream 59755 31723181 ~ 31725760 (-)
AMCG00020726 NA coding downstream 115021 31662637 ~ 31670494 (-)
AMCG00020720 tcf25,LOC106562269,LOC106562272 coding downstream 153458 31606288 ~ 31632057 (-)
AMCG00020721 NA coding downstream 190610 31594228 ~ 31594905 (-)
AMCG00020735 NA coding upstream 93534 31897326 ~ 31914451 (-)
AMCG00020739 NA coding upstream 220530 32024322 ~ 32038155 (-)
AMCG00020745 NA coding upstream 267409 32071201 ~ 32083067 (-)
AMCG00020744 wdr45,LOC102779567 coding upstream 300938 32104730 ~ 32109416 (-)
AMCG00020743 NA coding upstream 319599 32123391 ~ 32138907 (-)
G65315 NA non-coding downstream 27015 31757451 ~ 31758500 (-)
G65314 NA non-coding downstream 28826 31756262 ~ 31756689 (-)
G65297 NA non-coding downstream 73751 31711534 ~ 31711764 (-)
G65267 NA non-coding downstream 136664 31648624 ~ 31648851 (-)
G65221 gas8,LOC108276428 non-coding downstream 303546 31480756 ~ 31481969 (-)
G65397 NA non-coding upstream 254526 32058318 ~ 32061297 (-)
G65465 NA non-coding upstream 382690 32186482 ~ 32187711 (-)
G65468 NA non-coding upstream 408935 32212727 ~ 32215757 (-)
G65571 NA non-coding upstream 711611 32515403 ~ 32515617 (-)
G65753 NA non-coding upstream 1470384 33274176 ~ 33274444 (-)
AMCG00020713 NA other downstream 372692 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 976669 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1047539 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1254379 30449745 ~ 30531136 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other downstream 2252398 29520191 ~ 29533117 (-)
AMCG00020746 NA other upstream 318093 32121885 ~ 32122933 (-)
G65549 NA other upstream 554446 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 751068 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 804070 32607862 ~ 32610708 (-)
G65641 NA other upstream 851342 32655134 ~ 32657019 (-)

Expression


Co-expression Network