G65397


Basic Information

Item Value
gene id G65397
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32058318 ~ 32061297 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81780
taaaattgtgatttattcatttattagtGACACTTGATCAGTACATTACACACAGCAGTCTGAAATGTGATCGATTTTTCACTAGCTCTGTTCTTATCAATAACCAAACATGAAAAGCTGGCATAATCATTAACTACCctcctgaaaataaaagcatactTTCTGATATACACTTGGATTATATTtcctaataatgtattttaagtataCTTAAACCAGGTATATTTGAATTCtatgcatatttttgtttttaattttagcatattatttatacaatatattttaattgtattatttatttcttagcagatgcccttatccagggtgactaattgtatgtacttattttgtattatttgtatacttAGTCAAagtaaactaaattattttgtgtactAATTTTATACTTTTAGTAACAGTACCACATTTATACTTTGTTGTACTATTAGTATGTTTAAGTAGACTTTACTTGGTTTTGCTTATATTTTGCATAGTTACACAATGTAAACTTATGTATAGACACTAATAGTGTTCTTCTAACttcaaacattaatttaacattaccattacattaattatacaaaCATTTGATTTACTGTCCTGTTAAAATGATAGGTTACAAACacaaccatggttatctgagaaagataATATTACACAAGGCCCCCCTTTGAACTGCTTCACTTGCCTGAGTTTGCCTGTGTTTTTGCTAGTCATCAATATCTGCAAAATGTGTAGGCAAGCTACATGTGCTGTCTGTGATAAAAGGACACTTCAGTAATATGCCAATATGAGATTCAAAGCTCAAATGAGATTAAGCAATTACCCCCAGATTTCTCACCACGGATTTCACATTAGAGGTCATGTTTCCCAAATCTATTTTTGTCTATTCAATCAATCTCTgtgaatttattattaatacttctatcttattttggtttaattgcagaaacattTGAGCCATCCaattttttatttcagcaaaACACTTGCATACAAACTGGAGTAGTATTAGTATCACCTGGTTTAACAGAGAAGTGAGTTGTCTGTCATCTGCATGAACGTTCACCCCATGTCTATGAATAATCTCATCTAAAGGCAACCTATATGACAAGAATAACAAAGGACCCAGGACAGAACCCTTTCaaggaaacaaaatactgtCTATGGAGgactgcttttatattttgtaagtcgccctggacaaggacgtctgctaacaaatacgtagtagtaataataataataataattattattattattattattattattattattatgtatgatACAAGGAACTATCCATTTGATATAAAGGAGGAGTCAAAAGGTCACAGACATTTGTTGTTAAATCCCATAAAAATATAAGGTCAAAATAATGTAAGCATTGAACATAAaaattttcatatatatatatatatatatatatatatattaattcatatacTTTCGTCTTATCTGCACCCTATAAGACCATGTAAGTCCCAAGTTCTGTACGCAATCTGCAATCAACAAAACACACTatcataaatattgtttaaccTTTAAGGAGATGTCAAAGGTGAAGGTCAAATCATGAGTTTGAATCTTAAAtggaaggtcaaaggtcaaactATTTTCACCACAAGCGCATCCTTTAATTGCTCTATGATTAAATTATACATGATTTTCTACCTAATAAAGAAATTAGGTATTAACAACTGTTTGATGCACCCTACACTTTCCCTTTAATAGATTAAAAGATGTCCTGGGCTGTACTGCGCTGTCCTGGGGTGAGAGGAGGACCCCTTGCTTTAGCTGCCCCTGTATGTGCTGTAGGAGAAACGGCTGAGGAGCAGGGGCACATGATACTTCTGAGAAGGGTCTGTGATATTGAAGACAATCTGCAAAATGGATAGAAACTGCTCTCTCCCAGAACTTGCCAGTACTGCCCTGTTTCAAACCGCATTTTGTACATTCCTGGCAAGAATTCATCCCAGGTCAACAGCCCCGGGCAGCGGCCATCGCCATT

Function

NR:

description
PREDICTED: activating transcription factor 7-interacting protein 1 isoform X2

GO:

id name namespace
GO:0004806 triglyceride lipase activity molecular_function
GO:0016298 lipase activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU81780 True 2014 lncRNA 0.33 4 32058318 32061297

Neighbor

gene id symbol gene type direction distance location
AMCG00020739 NA coding downstream 20163 32024322 ~ 32038155 (-)
AMCG00020735 NA coding downstream 143867 31897326 ~ 31914451 (-)
AMCG00020727 nob1 coding downstream 323346 31731257 ~ 31734972 (-)
AMCG00020725 nip7 coding downstream 332558 31723181 ~ 31725760 (-)
AMCG00020726 NA coding downstream 387824 31662637 ~ 31670494 (-)
AMCG00020745 NA coding upstream 9904 32071201 ~ 32083067 (-)
AMCG00020744 wdr45,LOC102779567 coding upstream 43433 32104730 ~ 32109416 (-)
AMCG00020743 NA coding upstream 62094 32123391 ~ 32138907 (-)
AMCG00020751 kat6a,LOC103398109,LOC107697242 coding upstream 127253 32188550 ~ 32212493 (-)
AMCG00020752 NA coding upstream 172857 32234154 ~ 32244478 (-)
G65337 NA non-coding downstream 254526 31785515 ~ 31803792 (-)
G65315 NA non-coding downstream 299818 31757451 ~ 31758500 (-)
G65314 NA non-coding downstream 301629 31756262 ~ 31756689 (-)
G65297 NA non-coding downstream 346554 31711534 ~ 31711764 (-)
G65267 NA non-coding downstream 409467 31648624 ~ 31648851 (-)
G65465 NA non-coding upstream 125185 32186482 ~ 32187711 (-)
G65468 NA non-coding upstream 151430 32212727 ~ 32215757 (-)
G65571 NA non-coding upstream 454106 32515403 ~ 32515617 (-)
G65753 NA non-coding upstream 1212879 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1744404 33805701 ~ 33852626 (-)
AMCG00020713 NA other downstream 645495 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1249472 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1320342 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1527182 30449745 ~ 30531136 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other downstream 2525201 29520191 ~ 29533117 (-)
AMCG00020746 NA other upstream 60588 32121885 ~ 32122933 (-)
G65549 NA other upstream 296941 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 493563 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 546565 32607862 ~ 32610708 (-)
G65641 NA other upstream 593837 32655134 ~ 32657019 (-)

Expression


Co-expression Network