G65465


Basic Information

Item Value
gene id G65465
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32186482 ~ 32187711 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81870
TGTGGTGTTCCCAAGAGACAGACTGGAACTGCAAACATGATCTGAAGCtacacacgcatgcacgcacacacacacacacgcacacacgcacatacacacacgtacacacactcactcagtaTCAGAACGGTTTAAAGAGCCAGTGATTCGTAACACAGTCATCACTCCATCACCCCGGAGAGGCTGCTGTGTCGAGGACAGGGGGGGTGTCCGGGCTGTCTGTCCTCTGGGAACTCCAGACACGGTCCCGCCGTGGACGTTTTAAGGAATTTGGGATTTCTTTGTGCGTTTCTAAGATGACAGCCTTCTCGGGACACTCCCTGTGGCTCCAGGGGCCCCGTGCAGCCACGGCCCCCGCGCTCCAGTATTGCGACTCGTGACGGGGAGTGAACCCTGGACAGCGACGACTTCGCCTCTTCTCGTTTGttactgtttcttttttatttgaaattgtatttttattttttgggctgtcgtttattttgtttctgaatttgATCAGATTGGGCAGCTTCCTTTTATGACACGAGCTGACTCTTTTCCACTAGAAAACTTATTgtagagaaaatgttttttctataatataaaaaaaaagtgaaaaaaaaaatcctacataTTAATATTGGTACTGTCATTTTTTTCAACTTCTgtttgagaaacaaacaaaaaaaaaaggtattttttagCTGGATTCTTGGGTAATCttattaagaaattgaaaacgaaaaaaaaaattcaactcACTTCTAGTGACTTAAGATGCCTTTAACCTCCATTCCATCTCCTGTGTAGAGTTTTCTATCTTTGTTGTAGTATATTAAAGCTATTTTAAGACGAAAGAGACAGATATCTACAGTTCCCTAGCGTTTTGCGTTCTCTTGGTTGGGTTTTTATTTTCGGTGTATAGGGCGCCCGTGCGTCTCggcagcagcggcagcagcagcagcatgtaTAAACCAGCTCGGTATATTCTCGTCTGTTTATATCGCTTCCTCTTTTTGTATCCTTTGTAATTGTACATGGTGAGTTGTAagctaagagagagagagagagcgcaagagagagggagagggagggggggcggGGAGGCAGGCCACTCGTGGACCCCCCCGCGACACTCCCCCCTCCCTGCTTCTCAATCCCTGTATGTATTttcacttatttgttttttctttcttagcaaGTACTTTCAAAGAACtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81870 True 1200 lncRNA 0.44 2 32186482 32187711

Neighbor

gene id symbol gene type direction distance location
AMCG00020743 NA coding downstream 47575 32123391 ~ 32138907 (-)
AMCG00020744 wdr45,LOC102779567 coding downstream 77066 32104730 ~ 32109416 (-)
AMCG00020745 NA coding downstream 103415 32071201 ~ 32083067 (-)
AMCG00020739 NA coding downstream 148327 32024322 ~ 32038155 (-)
AMCG00020735 NA coding downstream 272031 31897326 ~ 31914451 (-)
AMCG00020751 kat6a,LOC103398109,LOC107697242 coding upstream 839 32188550 ~ 32212493 (-)
AMCG00020752 NA coding upstream 46443 32234154 ~ 32244478 (-)
AMCG00020753 NA coding upstream 79435 32267146 ~ 32269733 (-)
AMCG00020757 NA coding upstream 102185 32289896 ~ 32291454 (-)
AMCG00020758 NA coding upstream 180407 32368118 ~ 32369718 (-)
G65397 NA non-coding downstream 125185 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 382690 31785515 ~ 31803792 (-)
G65315 NA non-coding downstream 427982 31757451 ~ 31758500 (-)
G65314 NA non-coding downstream 429793 31756262 ~ 31756689 (-)
G65297 NA non-coding downstream 474718 31711534 ~ 31711764 (-)
G65468 NA non-coding upstream 25016 32212727 ~ 32215757 (-)
G65571 NA non-coding upstream 327692 32515403 ~ 32515617 (-)
G65753 NA non-coding upstream 1086465 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1617990 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1644024 33831735 ~ 33835514 (-)
AMCG00020746 NA other downstream 63549 32121885 ~ 32122933 (-)
AMCG00020713 NA other downstream 773659 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1377636 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1448506 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1655346 30449745 ~ 30531136 (-)
G65549 NA other upstream 170527 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 367149 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 420151 32607862 ~ 32610708 (-)
G65641 NA other upstream 467423 32655134 ~ 32657019 (-)
G65679 NA other upstream 698653 32886364 ~ 32891493 (-)

Expression


Co-expression Network