G65468



Basic Information


Item Value
gene id G65468
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32212727 ~ 32215757 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU81873
GCTCCCTTGGCCCcgctctccccctccccccactagGCAGGCTCCCGTTTCACTCAAAGATGGCGGCGGCTGTGGAGGCTCTAGTCCCTGGCTGCAattttggtgttgttgttgtccctTCTTCGACCCGTTCTCGGCACATTGTTCCCGGAGACTCTACCCGAAAGCCCGGGTGCGCGCACTACTGAGCTTGAGGCGGCATGAAGGTGATCGGGCAGCGCTTGTCCCTGGGGTGAAGTTGCGTCCCGCCGGAGCCACAAGCAACGCCACTGCGACGAGAGGCTGCGGCCTACACCTGGagcacagctacacacactcgAGCACAGGAAGAAAAACACTCTGTCCCACGGGACAGTGGAGAGAGGACACAACCTACTTTGTTCTTGGGCTGATTTTTCTGTCCATtgcttggcttttttttttttttttttttttNNNNNNNNNNTTCTCTCTCTACTTTGATATTAACCCCTGTGGGGGGCTGTGGTCCAGGAGGACGTATAAAACCAGACCAGGACCTTTTTGCAATTTTGGAAAACActaattaagaaaagaaaaaaccctGACTGTGAAAAAGAATaccagatttatttttgctttcattcCCTGGGCATTTGGACACTTTCCTTTTGGACGGGAGTACTTGCTCACACCTGCAGGGACACAGCAAGCGCTTGAGTTCCCAGAGTGCCCTCGCAGTCTGTCGGCTCTTCCTTCTCCAGCCCGGCGCCCTGCTCCGGAAAGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU81873 True 745 lncRNA 0.53 2 32212727 32215757

Neighbor


gene id symbol gene type direction distance location
AMCG00020751 kat6a,LOC103398109,LOC107697242 coding downstream 234 32188550 ~ 32212493 (-)
AMCG00020743 NA coding downstream 73820 32123391 ~ 32138907 (-)
AMCG00020744 wdr45,LOC102779567 coding downstream 103311 32104730 ~ 32109416 (-)
AMCG00020745 NA coding downstream 129660 32071201 ~ 32083067 (-)
AMCG00020739 NA coding downstream 174572 32024322 ~ 32038155 (-)
AMCG00020752 NA coding upstream 18397 32234154 ~ 32244478 (-)
AMCG00020753 NA coding upstream 51389 32267146 ~ 32269733 (-)
AMCG00020757 NA coding upstream 74139 32289896 ~ 32291454 (-)
AMCG00020758 NA coding upstream 152361 32368118 ~ 32369718 (-)
AMCG00020764 NA coding upstream 158331 32374088 ~ 32378924 (-)
G65465 NA non-coding downstream 25016 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 151430 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 408935 31785515 ~ 31803792 (-)
G65315 NA non-coding downstream 454227 31757451 ~ 31758500 (-)
G65314 NA non-coding downstream 456038 31756262 ~ 31756689 (-)
G65571 NA non-coding upstream 299646 32515403 ~ 32515617 (-)
G65753 NA non-coding upstream 1058419 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1589944 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1615978 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1745420 33961177 ~ 33962191 (-)
AMCG00020746 NA other downstream 89794 32121885 ~ 32122933 (-)
AMCG00020713 NA other downstream 799904 31365663 ~ 31412823 (-)
AMCG00020702 NA other downstream 1403881 30800582 ~ 30808846 (-)
AMCG00020700 NA other downstream 1474751 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 1681591 30449745 ~ 30531136 (-)
G65549 NA other upstream 142481 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 339103 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 392105 32607862 ~ 32610708 (-)
G65641 NA other upstream 439377 32655134 ~ 32657019 (-)
G65679 NA other upstream 670607 32886364 ~ 32891493 (-)

Expression



Co-expression Network