G65590


Basic Information

Item Value
gene id G65590
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32592482 ~ 32594454 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82011
tcTCCTCAGACAAACGTTTAATGCGGTTAGTCAGATATATTTCACAGATATGTCTACGATTTTAAAAATAGTCATTTATTAGAacacttttaaaactaaaatagtttCATCATCAtgatatcatttatttatttacgagTTTAAAATTCTCTCGGACGGCTTGCTATCACCCATCAGCCGTGGGATCACACACTCAGGCAGGCAGAGTACGCTGTTCTGCTCCGGCACCCTGGATTCACCCTCAGGGGTGCGTGGCCCTGGACCTGGAGAGGCCCCATCCTGCAGGGCCTGTCAGTCAATGCAGACCAAGAACAGACAGCGCCTCAGAAACACCCCCTCCAATCACTTTGAACCTGGGGGGTCATCTCGGTCAGCTGATTCAGATGATTGGTAACAAACTGAAGATCAGAGTCCTCCGAAGCCCCTGGCACAGTGGTTTCCCTGCCCGGGCCGCCCCTGCCGAGGTGCCAACGTGGTGTCCAGTGGCGGGGGAGTCAGTCAGCGGGGCTGGTTTGCGGTCACAGAAGCGCCTCTCGTCTCTTTTCTCTTCGACCTGCTTTCACACTCACAACCAGAACCTGGACGGCTGGACCAGTGGGTCAGGACGCTGGTTGGCGTGCTGGGGTGACTGGCTGGGGAGACCGGACAGCACATCTGACAGAGGGGCCAGGGACGGCCGCCGTGGCAACAGAGCCAGTccagagaggcagagggagaggagcaTGATGGGACTGCAGAGAACAGGAGGGCGGATGTGGGAGAGAGGGGCAGGCGGGGCCAGGGAGGCACAACTAAGATTGCGTTTGTGGAGCACAGATTGGCGTGGCACGAATGCAACCTAACTGTGATGTAATACCCAGCTAGCTagctaactaactaactaactaactaactaactagaGTTACCCATCAGGACAATGactgggaaaaaaacagaatgaaatggACAGAGGgatagatagaaagaaaaagagaggacAAGATTACAGACTCCAACTCTAAGCTCCTGTTCAAAAGTTTTTACAAAGATGTCACACCTATCTGTTTATTTaccaagtttattattatttagttcattatataaattaaatttcaaaacAGACTTTCCCACAACGCCATACTAGCCTGTCTTCAGCGCATCTCCCAAGCCCAGATAAACAatctcacacacccacacactcactgatacacacacacaatcgcaCACTCCTCAGAGCACCCCAGAGGCAGCACGGACAGTCCCCACGCTGTCGCTGGTCCTGGTCTGAAGCTGTGCTCGGGTAAATCTGGTTCAGATATAACCTGCTGTTGTGTCAGTGAAAGAGGGCAGAGCACAGAGATGTGCCCAGCTGTGCTGCTGCCCCCTTCTGGTGGCACTGTGTTactgagtctctctctctccctagcTTTATCTGTCATCCCTCTTTCTGTCCCCACACCCCCttctccatctgtctctctatctcaaTGCAGcaaggaggaaagaaagaatgagagagaaaggTACAGGGGGATCTGAGTTAGGAGGTATTCatggggctgtgtgtgtgtttttgtgcaagTATGTTACAATTTGAGTGTGCATGTAAGTGTGACTATGTCTACGTTAGTGTGCCTCAGTTAGTGCGTcagtgtgtgctctgtgtctttctgaaacagacagacagacagacagacccctCCTCAATGACTCCAGACAGATCGACCAGCTCTCAGCACTCTCTGTCCGAACctctgtctcgctctctctctctggggggggggggggggggggggggggggggggggctaggGTCGGAGGTCATTGCTCCTTCACGGTCAGCCGCTCCAGCTTCCCCACCGCCTCCTCTGTCACGACCTTTGTCTTCCTCTCTGGGCTGGGCGTGTTGGGGTACCCCCGGTCCCCGAAGATTGTACTGCCCACCCTCACGTTGGTAGAGCCCACTTCGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82011 True 1952 TUCP 0.52 2 32592482 32594454

Neighbor

gene id symbol gene type direction distance location
AMCG00020770 NA coding upstream 41101 32540939 ~ 32551381 (+)
AMCG00020766 NA coding upstream 64448 32520199 ~ 32528034 (+)
AMCG00020759 NA coding upstream 137649 32450177 ~ 32454833 (+)
AMCG00020755 NA coding upstream 229820 32357858 ~ 32362662 (+)
AMCG00020756 NA coding upstream 236653 32346662 ~ 32355829 (+)
AMCG00020771 NA coding downstream 11317 32605771 ~ 32608552 (+)
AMCG00020772 NA coding downstream 57278 32651732 ~ 32656484 (+)
AMCG00020782 NA coding downstream 172878 32767332 ~ 32770643 (+)
AMCG00020786 ftsj1,LOC107589293,LOC107706451,LOC107708504,LOC107703563,LOC107591736 coding downstream 216839 32811293 ~ 32824902 (+)
AMCG00020789 NA coding downstream 323166 32917620 ~ 32923763 (+)
G65579 NA non-coding upstream 6768 32563430 ~ 32585714 (+)
G65534 NA non-coding upstream 147838 32443881 ~ 32444644 (+)
G65503 NA non-coding upstream 284763 32307438 ~ 32307719 (+)
G65452 LOC106568273,LOC106562702,LOC104948043,LOC105031130,LOC102213975 non-coding upstream 323025 32268626 ~ 32269457 (+)
G65437 vdac3,LOC107671013,LOC107559564,LOC107754399 non-coding upstream 324281 32182362 ~ 32268201 (+)
G65594 NA non-coding downstream 35269 32629723 ~ 32686320 (+)
G65670 NA non-coding downstream 284645 32879099 ~ 32882118 (+)
G65829 NA non-coding downstream 1455540 34049994 ~ 34051037 (+)
G65831 NA non-coding downstream 1467698 34062152 ~ 34062595 (+)
G65873 NA non-coding downstream 1627892 34222346 ~ 34261929 (+)
AMCG00020748 NA other upstream 311647 32274286 ~ 32280835 (+)
G65433 LOC106580491,LOC108439670,LOC103398109 other upstream 403101 32186614 ~ 32189381 (+)
AMCG00020742 NA other upstream 497296 32094024 ~ 32095186 (+)
G65343 NA other upstream 727776 31863383 ~ 31864706 (+)
AMCG00020715 gas8 other upstream 1108012 31459502 ~ 31484470 (+)
AMCG00020783 dock5,LOC106585561 other downstream 113479 32707933 ~ 32744735 (+)
G65691 NA other downstream 352277 32946731 ~ 32989445 (+)
G65705 NA other downstream 513419 33107873 ~ 33108426 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other downstream 1360352 33954806 ~ 33960582 (+)
G65830 tet3,LOC106906237 other downstream 1464657 34059111 ~ 34059465 (+)

Expression


Co-expression Network