G66008


Basic Information

Item Value
gene id G66008
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34784212 ~ 34787474 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82530
TGTAGGTAaacaagtgtattttatttgtattttctttactgGCAAATATAAAGTACTGCTccacattttcacagaaaaaatgctttattttttattttttgttgtcgttCGTTTCTTCATCCCTTCTCCACTCCCAACTCTAAAGATCAATCAGTGCACAAAAACGTCCACATCCATGAACAACCTCCTCCGACCCGTCTCAGGGAGAGCGTCGGCTGTGACAGGGGGGTGACATGAAGACTGtttcccctgtgtgtgtgtggggggaggggggggagggtgtGAAATGAAGGGAGAACTGAAAAAGGCACAAACACCAGCAACAGGAACAccaacactaataataataataattacaggaTTGAGGGGATGACTGGGAACTTTTGGAAAGGTTCTTGTTGGATTTGGATTTAAGGCTATTCtcttgtatatatatatatatttgttgacTACAAACATTTGTGCGATTGCATTTGAATTAGATGTCTGTGTCTTAAGATCCACACCTGCGGTTGTGCAGATGAAGCACCAGGGACTGTGCAGACGCTTCTTTCACACgaacaggaacaggaagtgCAAGTAACCACAGAGTCGCATCCAGCCAGGAGTCTCACCTGACCGGCCTTCTGCTGTTGTGCCAGCAGGAGGAACCCTGGCGGGGCTGGTATCATATCACTGTAAACCAGTTAAAACACTGGGGGCTGTGAGGGGAAGAGGGATCACGACAGGAACCATAAATGACAACAAAACTGAACGTAACAACCACACAAATGAACGCACCAGGGCAGGGGCAACGCTTGTGAGCGAGGTCTCAGCAAGTGGACTTTTTTTGCACCCTTacgataaaacaaaaatgaacagaaaatccAATGCAACTTTCACAAATTGGCTGCTTTAACGAAATGAGCCAACCACAGCGCACCTCAGCCCAGCCCTGCCACCCCACCCCTACTGCCCCTCCACACCCAGTGGCCCGGCGGCTCGCTCTGATGACAGGGGCCCTGGAGTTGAAAGGCTGGGAGATGTCCTCGGTGGACAGCACAGCCCACCGAGGAGCGACACTCCCTGGAGTGCAAAATCGCTGGTCTGGACCCACAAGTCCAGACCCGGAGGACAAAACAagacaggaagagaaagaaaggaagagggGAAGAAGTAAGCGTACCGACAGAAGCATGTGACAGGGGACTGTGCCTGCAGGGGGGAGGCAGCTGTCTTTCTTCCATAGACTTTCCACAGGGAGGGAATTAAAGACGcgattggaaaaataattatagattCCGTCTTCAGGTAAAGAAGACATTGTGGCACAAGAAAGGGTGTTTTCATAGCAAAACAGATAGAAATCTCCTTCAGGAATTACCAGCAActaagataaatatatttaactctAGGAACAACTTTACCCGTCTAAAAAACTATGCCAATACGGCCCgccgagacacacacacacacacagtgaaatcttttgttttaaagctgtagataaataataacactgaacTATTTATTccacacacatttacagagCTCAAAAAACAACAGCGATTCAAGCAGTAACTAACTAtaatcttaaatattttttgtagtattttttagatcatatataatttttttatatatatatatatataatttttatatatatatatatatatatatatatatattttcttaaattatttacataaaaattgCTACATTTTGCTGAAATAAAATTTCGTATTAAATAGCGGACACAGTGGCACATCGCAGTGCACCGCAAGGAGCAGGGCCACACCACCGACAAGCAGGGGCCACGCCTAGGAGCAGGGGCCAGGAGGCGTGGGCCCCGCTCGTAAGGGCTTCCGTTTCACTAATGGAATGTGGTTTTGCTGCAGGTTAGGTTGGGTTAGTTTTCCCTTTTCATTCCCCCTTATTCACATTACTAGTTACCTTAATTGCACCAAGTAATGAAAACTAAGATGTACGCCAGCCATGAAGAAGCACACAAACCCCAGGGACTGTaatcagagagagaggtgtggaGGCAGTAGAAGAGCAAACCCCCaccccacaaaaacaaaaacaaaaaacccgtCCCCCCCTTCACAATCTCATGCTGCACATTGTTCTTTAGGTTTCAATAACATTAGGCTTttcaattcatatatatatatatatattttcttccgtaataaaactttaaaatggcAGGCGTTGGTCTAATGTAAGAAATGGACTTAAGATGAAGAAAACccataaccttttttttttttttttcttgttttaaaccCCCAACAGTCCTAGAAAGGAAGGAATCCACAGTCAAACCTGTCACCTGACTGACTGATGCGCTAGCAGACCCCACTGCTCCGCTCCGCTCACACCCTGTTGTAATAACTGTAGGGCCAACAACGATACTAACACACACCACCCCCCCCGTCACTTTGTAACGGACCCTCGGAGACGTGGTGCGTTTCTGttgcacaaaaatgtaaaaacaaaaacaaaacaagcaaacaatccCCCAAGATCTGGAGAGACAAACTCTTAAGTGCAAATGTCTTCAGTCGACCATAGTGTGAGGAGGGCATCACCCTGCCCCTCCCTGGGACCGCAACCCCCTAGTGCTCGCTTGGTGGAACAGAGGAGGAGTGGGGGGCGGGGAAGGTGTGGCTGCAGGCCACTGGATCTAACCAGCCTAGAGTGGGCAAGGCcaagagaggggaagagggtAGCAGGGGGCTCGATGACATCCCTGCCGAAGCCTTGAATCTGATTGGACCGGGCAGAGTGGAGTGGGCGGGGCCCGGTCACAGCAGAGCAAGTCCGAGAGTGGGATTGGACCAGATGTGGGGGGGAGGGCGGGACAGGACGGGACAGGTCGAAGCAGGTCCGACTCGGGAGTCTCAGAGGAGCCCGTGGATCTGAAACGGGGAGTCGGTGCGGGGTCAGGTTTGACTATCTGATTGGACCGGACAAGGTGGCGGGCTTGGGCGGGCATATCGCTTTCTTATAGGCTGCAGCCCAGGGCCTTGGCGTGGGCGGCAGACAGCTGCTGCACTTTGAGTCTGCGAAGGCTGGCACTGGAGTAGCCCTCGTCGCTGCAGCTGCTGCGCAGGCTGCCCCGTTCGTCCGAGTCACTGACGCTGCTGTTGCTCCACTCCAGATCCCCCATCAGGTAGTCTGTGCCCTCCACGTCCACGTCAATCTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82530 True 3199 TUCP 0.48 3 34784212 34787474

Neighbor

gene id symbol gene type direction distance location
AMCG00020826 NA coding upstream 282010 34498286 ~ 34502202 (+)
AMCG00020827 NA coding upstream 290822 34481379 ~ 34493390 (+)
AMCG00020819 LOC107597267,LOC107654641,LOC107741205,LOC105890027,LOC107663217 coding upstream 308567 34462466 ~ 34475645 (+)
AMCG00020824 NA coding upstream 327311 34452211 ~ 34456901 (+)
AMCG00020825 NA coding upstream 332485 34450528 ~ 34451727 (+)
AMCG00020835 hk2,LOC106585103 coding downstream 63188 34850662 ~ 34865362 (+)
AMCG00020840 NA coding downstream 91216 34878690 ~ 34879805 (+)
AMCG00020842 NA coding downstream 94017 34881491 ~ 34892993 (+)
AMCG00020844 NA coding downstream 132344 34919818 ~ 34927630 (+)
AMCG00020843 camk2b1,LOC105905148,LOC102297714 coding downstream 147541 34935015 ~ 34936792 (+)
G65995 NA non-coding upstream 34061 34749498 ~ 34750151 (+)
G65996 NA non-coding upstream 34869 34749127 ~ 34749343 (+)
G65994 NA non-coding upstream 36098 34746893 ~ 34748114 (+)
G65978 NA non-coding upstream 51833 34676911 ~ 34732379 (+)
G65962 NA non-coding upstream 257137 34526867 ~ 34527075 (+)
G66072 NA non-coding downstream 237529 35025003 ~ 35026229 (+)
G66151 NA non-coding downstream 379594 35167068 ~ 35170275 (+)
G66231 NA non-coding downstream 645794 35433268 ~ 35433558 (+)
G66258 NA non-coding downstream 765429 35552903 ~ 35553230 (+)
G66290 NA non-coding downstream 928571 35716045 ~ 35716249 (+)
AMCG00020820 NA other upstream 372592 34404534 ~ 34411620 (+)
G65830 tet3,LOC106906237 other upstream 724747 34059111 ~ 34059465 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 823630 33954806 ~ 33960582 (+)
G65705 NA other upstream 1675786 33107873 ~ 33108426 (+)
G65691 NA other upstream 1794767 32946731 ~ 32989445 (+)
G66060 NA other downstream 180370 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 360129 35147603 ~ 35149418 (+)
G66149 NA other downstream 376339 35163813 ~ 35164985 (+)
AMCG00020874 NA other downstream 959682 35747156 ~ 35750446 (+)
G66362 NA other downstream 1079919 35867393 ~ 35908402 (+)

Expression


Co-expression Network