G66060


Basic Information

Item Value
gene id G66060
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34967844 ~ 35008322 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82596
cagcagcagcagcggcacACGATTGGTTTAAATTGCCCGGCTACGCCATTGCGATTGGCTGGGCTGATCTTCGGTCTCCCTGACAGTCAGTCCCCGCCCCCTCTCCCCCCAATCCGATCCGTCTCAGAGTCTGTGTGGGGACTgcatccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcatacatTTTGGTGAAGGAACAGCAAAGACTGACTAAATTGACGTTGACTGAGAGAATAGTCTGTGAGTTGCACACATCGGATGAACAGGAACAGTTCTTAGAAATGCCTGATCCTCCTGGCAGAGGCAGCTGCTAGTGTCTGGGCTAACGATACTCATACTGCTGCACTCAGGGTCACATGGGGGCCTCGGTGACGGACTCCTGGGGTCTGGAGCACCCAGAAGTCCTCACTCTGTAGTCCTCCAATGTTCCTACTCCCTACTGCATGTGGCTGCTATACTACACTGTGCCACACTCTGCTATACTAACCCCAgtcatatattatacattttacagggCAGCGCCACTCTGAACCCgccacagcacagcactccTATATTACTGTGTACATCTATTATTCATCTCTGTGCCATCCTAACCCCTTACTGCTCCACATTGACACCCTTGACCTCccacctctgacctctgacatCTCACCACATCCCCTCCGCTGTAGCACCCGGCACTCCTGCACACCTTTTAAAGCCCAGCTCTGCCCCCTGGCACATCACGAACACCCCTAACCCCCCTCATCCGCAGTGCCCAGTGCCATGCTGTGCCGGTGGGCTCCGAAGCAGCCTTCCCTGTTCCATCTGGACCGCTGGGTGCCTCCTGTCCTCTGCTGACACTCCccacaaaacactgcattctccATCGAAACTCATATTACCCATAGTGCACTGCTCCAAGCTGTACTAACATCCCCTGCTACCACTGATCCTAAGTAATGCAGTATAGTGCCGTACACAGGCCTTGGTTCCTATGATTCAAATCCAGACACTCTGCAGCAATGAGGTGTGCCATCATCACTAGTATTGTTCttgttattatgattagtattattactattatgattattggTTTGTCTGTTAGTGCCACCTAACAGCCGTCGAGAGTAGGAGTGCATGATGTCAGCCTGCGTGAATGTGCATTTCTGAGACGCCAAACGCAAGTCACTGTGGGTAAAGGACTGGAGCACTGACGCAGGGTGCGGACTCGTGCCGCAGTTTGTGAATGCTGGACTGCGCTGGGCCGGGTTTCAGGGATGTGTGCAGAGAAGGGTTGATTCGGTGTAAGATTTGCTACAGGCAGGAAAGAGGACGTTGGCAACAAGGTGGTGGGTGACGAAAGTTGTGGTGTGGTGGCAGcttctgttgtttattttgggaGCCATTTggtggtttagtttttttgaggGTTTTTTGTGTACCGCCCCTGGGCCTCGGACTGACGTTGTTGCGTTGCATTATGGTGCTCGTCTCTTGTTTGCTTCTACAGTGGAGAGACTCACTTTTGCGAAGACCCCCGAAACGTCTCGCTCTCTTCCTGGGTTTCTCTCCCAGGGACTCCCAGAGATCACCGCGTTGGAGAAACTGGAGGGGCGGCAGCAGTGCGGCTCCCTTTCATACACGGGCCAGGAACTGAAGCATATCAATCATTTCCTGTCTGCTGTATTGGAAGCAGTCGGGGGGGTAGAGAGATTTTAACATGGAGAATTAGCTGTACGTGAGAAGATCGTTGGCTCTTGGACGGTTTTTGATTTCTTACGTTTGTGTTGAGTGAGGAACCTGCAACTTCTCtttctttaaacattattattattgttatgaatatttttacttttttatttggtgTGGGGGGTTCAGAAATGGGTGTATTTGAATGTTATTAGTTATagtatgatgattattattattttgaataattattattatgaatatgacTGGTGTAAGGCTATGATTGTAACAGACGGGGTGCAGATGACAGGTGGGGGGATCATACCCAGTATTTGGAGCCGGACCCCCAGCCTGTGTCAATAGGGAGGCAGGGAGCCGTGTGTCTGCCATGTGGGGGGAGAGTGGTAGACATGGGGAACAGATCATCACTCgcataaaacacaaaagccaAGCACAAAACGTagcaggcacaaacacagcaggtGGCAGTTACAGCCGGTGTTGctgttgcttttgcttttggtgtgtattgttttgtgtgtggggtCTGCAGCAGTGCGGTGTAATCATGAGCGGTGCAAGGACAATGGCAAGGCAGCGCAGTGaggtgtagtacagtacagtacagtacagcacagtgcagtgtagggCAGTGCAGAAGGCTTCAGTGTCCAATCCAAAAAAATCAGTGCTGGACAGAGTCAAAACAACAGACTGTATTGcaaaactgatttgtttttctattgtaCACTGAGGTGCGACTGTGTGCGATTGTGTCTAAACTCATCCACAGTCTAGTCCACACAGTACCTCAGAAGGTCGGTGCTGCCCGGCGCGTTGTGACAGGGCTGGCCTGGACACGGAGCCCGCTGGGTCTTTGTGAACTGACTGAGGCTGtctgatgatttatttattctttgtaaGGCTTTTAACAGCTGGATGAATtcgttttgtatttattttattttattgtattaaaaatcaatataatcaTGTGCTTGCTTTTCCTCTGTGTCGCCCATGAGAGCATCTTTGAAAGCTCTGTGAGGGGCGTTAAGGGGAGCAGCCCTGAGGGGCGTCGGCACAGCAGTCACTGTAGCACAGAGACTGCAGGCTCCTCTGTGAACACAGCCGCGTGGGAGACTGGTCACGCCTGCACCCAGCTGCGCAGAGAGAACAGCACACTTCCGAGGAAGAGGGGTccagtggagagaaagaaacaattatatgctgtttttttttgttttttttttttttttttattcgcTTTCTTTTTCCGCCTGCAATATTTTACAGGACACTTGATTTCTTATTGAGCTTCGGCCCGGCAGACTGACCGGTGTCCCCCGCCCCCACACGTCCACCGCTCAGGGCAGATTCGCACAGAGCCCCTACAGGCTGATGTATCACTGACACTAGCAGGCAGGCAGAGGCTCCGAATTCCCACGCCAGCCTCGTTAGACTCCTCGAGGGGCGCCCTGTGAATATGGTACATTAGCTGGCCATGCACGAGGCTGACCCCCCCCTCTGTCGTACAGCCCCAGCTTTCACAGGACCCTCCCACCTGTACATGCTACCAACTCCTGCCACTGTCCTCGCCCCCGATGAACTCCACTTCCGTTTCACtatggttttatatatttttttttcctgtcctgttttattttgtttcgttttttgtATAAGAAATGGGATTGACAGATTCTGTCCGCACCAGAACACACTAGCAAGGGTCACCAAATTGAGGGCAGAAATGATGGCAAGCGCGCAGTCGGGTTCAGTTGAGTTTCTCGGCTGTTTCTCGCCTTGCTGGGAGCGCCTTCTTCCCCTGCGCTGGGAAAGCGAGAGGCGAAAACCACAGACGTGCACCCGAAAAAACAATGTCTGTAATGCTGACAGAGGAGTATATGTGGACTGCAGGTGCGGATTATATGTTATCGCGGCCGAGAATTTTTATTGGCAGGAAGTGGCGCGTGTGTGATTTGTGAAGGGCGCGTTGCTGGCATTTCAGTAGGCATCCGTAGAGATCCGTGCTCTGGGCTGTGTTTGTAGTTTGGGCAATCAGTTCATTTCCACTGCAGCATCTCCGCTCTCGAGTTCCAAAGCTGTATCCCACCTCGGAAAGAGGGGCAAGGATCGCCAGGCACGGCCTCCACCCGTTTCTCACACTGTCTTGTCTCTtgccctctttctttctttctttctctctctctctctctctctctctctgctcttccGTGCCAAAGCCAAGATAATGTTACAGGCAACTTCTTacgaaaaagaaaggaaaataatattgaattaacTACCTAAGAAAAATAGAGAGCAGACATGATAAATAAgtgatttgaattaaaaaaacgtaGCGCAAAAgcgaaacaaaattaaatcaccCGGAATCTCACGGATAACGCGcctcgtttatttatttatttttcatataggtgattacatttttccattgtattattttgcttcGTTCAATAAAGACATTATCTTCTCACTGGCgttggtgtgtttgtgtaaaaggATGTATTCAAAAAGCCGTATTTCAGGAAACTAAGTAGACAATCAGTGGACATACCCAGCTTGAGATATTTAGATAGCTTGTTAACAATGGTGTTTCTGTGCTCTGACCGTTAGCAAATGAAAGGAGAGAACAAGAGCCTATTCCTGTCAGATTTCAgtactttttcatttcagaCTCTGCAccgttttgttttctgttcaaaaCTTGCACTGGATGATTccatttgtaatattaaaactatttatatatagacaAACACAGGCGAACACTGGCCTTTTAGGAGTGAATTGTTTTGCTCCGAGTCCAACAGTGTAGCACATCGGAGGGGGGCGGGGCCTAATGTGTGGCACTGCCAGGCAGGAGCCCGGTTTCGGGAAGCAGAGCAGATCCCAGATGGGGTTAGTTCTCACCCACAGGAGGGAAGACGCCTGCAGTCCCAGCCGTTCAGAAGCTGCAAGGTCACCTGGGTACAGATCGACCTCCCTGGAGGGGTGAGCCTCATTGTACACCCTTAAGTTATGACTCATCTTGTACAGATCCCAGTATTACATCACCCCCTCCACCGATCTGATCAGTGAACTATAGTGAACCCCCACATTCAACCAATCTCTAAATCAATAATGGCACCCCTTGTAGCACCAAATGAAAACCAGCGTGCCAACGGAATTGCACCAGCCTGCACGTCACAGCTTCCCCAAACATGGCAACTCTTTGCAGTTGGTGTCATATAGGCACTGTGAGGAGGCAAACTTGCTCCAACGTCTCCTTTTGATAAGGACAATCAGTAATTTCATTAAGTTTAGCTGTGTTATTAAGATCTTTGTTGTATCCTGTGTTTTGTGACATGCATGTTTGTGGGCATCGCCATTATTGTTGAATTAAAGGGGGGGAGGCCACCATGGCATGGTATTTAAAGGGGTGGGGAAGGGCAAGTTTATCTATGGGGGTATATTGATGAACAGTGGAATcggttatttattgttttggggAATTTTATGGAAAACACAAAGTTAAGTTTAggttgactttattttattgttaattttacttaatatttttttgttttgtactgatttTTGGTTTCCTGCTTGAACACTGCCccattttgaaataaactttttttgcACTGCTCCTTTGTCTCGCTCCCCCATCGAGAAACTGGGAGTGCTTCTTTACAGGCACCCATAGAAATAAAGTGCACAGTATGCTGTAAGTGTGGTAAAACTTGCATATTCCATTTAG

Function

GO: NA

KEGG:

id description
ko00020 Citrate cycle (TCA cycle)

RNA

RNA id representative length rna type GC content exon number start site end site
TU82596 True 5451 TUCP 0.48 2 34967844 35008322

Neighbor

gene id symbol gene type direction distance location
AMCG00020841 camk2b,LOC105889509 coding upstream 1359 34964622 ~ 34966485 (+)
AMCG00020843 camk2b1,LOC105905148,LOC102297714 coding upstream 31052 34935015 ~ 34936792 (+)
AMCG00020844 NA coding upstream 40214 34919818 ~ 34927630 (+)
AMCG00020842 NA coding upstream 74851 34881491 ~ 34892993 (+)
AMCG00020840 NA coding upstream 88039 34878690 ~ 34879805 (+)
AMCG00020847 zmiz2,LOC107588944,LOC107698211 coding downstream 47822 35056144 ~ 35076420 (+)
AMCG00020848 NA coding downstream 69079 35077401 ~ 35082383 (+)
AMCG00020850 NA coding downstream 104837 35113159 ~ 35120161 (+)
AMCG00020858 NA coding downstream 137755 35146077 ~ 35147542 (+)
AMCG00020856 NA coding downstream 150352 35158674 ~ 35161096 (+)
G65995 NA non-coding upstream 217693 34749498 ~ 34750151 (+)
G65996 NA non-coding upstream 218501 34749127 ~ 34749343 (+)
G65994 NA non-coding upstream 219730 34746893 ~ 34748114 (+)
G65978 NA non-coding upstream 235465 34676911 ~ 34732379 (+)
G65962 NA non-coding upstream 440769 34526867 ~ 34527075 (+)
G66072 NA non-coding downstream 16681 35025003 ~ 35026229 (+)
G66151 NA non-coding downstream 158746 35167068 ~ 35170275 (+)
G66231 NA non-coding downstream 424946 35433268 ~ 35433558 (+)
G66258 NA non-coding downstream 544581 35552903 ~ 35553230 (+)
G66290 NA non-coding downstream 707723 35716045 ~ 35716249 (+)
G66008 NA other upstream 180370 34784212 ~ 34787474 (+)
AMCG00020820 NA other upstream 556224 34404534 ~ 34411620 (+)
G65830 tet3,LOC106906237 other upstream 908379 34059111 ~ 34059465 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 1007262 33954806 ~ 33960582 (+)
G65705 NA other upstream 1859418 33107873 ~ 33108426 (+)
AMCG00020855 NA other downstream 139281 35147603 ~ 35149418 (+)
G66149 NA other downstream 155491 35163813 ~ 35164985 (+)
AMCG00020874 NA other downstream 738834 35747156 ~ 35750446 (+)
G66362 NA other downstream 859071 35867393 ~ 35908402 (+)
G66506 NA other downstream 1246377 36254699 ~ 36256511 (+)

Expression


Co-expression Network