AMCG00021082


Basic Information

Item Value
gene id AMCG00021082
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 2402174 ~ 2412334 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021082
AGTGCGCAGACCACTGTGCAGAACCGCACAAACTGCACAGACTGCACAACCGCACAAACTGCACAAACCGCACAGACTGCACAACCGCACAAActgcacaaactgcacaaactgcacaacCGCACAAACTGCACAGACTGCACAACCGCACAGACTGCACAACCGCACAAACTGCACAACCGCACAGACTGCACAGACTGCACGGGGATTCACCGAGGGACTAAAgtctttgtgtatgtgtgaggaGTGCGCCGCAGATGCACAAGGACTGTGGCTACAGCAGCGGAGAAGAAGCCCTTTGTGTGAATTGCAGGCCCAGGTGGTATAAAGATGACTGGGGGCATCACGGCTGCAAAGTGTGTCAGTCCTGTAAACTCGTTAACAGACACCAGACCTCCAACTGCACCGGCAGCAGCAACGCGGTGTGTGGAGAGTGTTTACCAGGGTTTTTCAGTAAAACTCGTATCGACGGTCTGCGGGATCTGGAGTGCATGCCCTGTGCTCTCTCGTCCGCCAGCGAGCCTCAGTGCACAAGAAGCCGAGGCATCGATGTTGTGAGGGTGTGGAGTTCAGAAGCAACCCCGCAAGATGCCACGATACCGGCTGCAGTTTGTGCCGCTTTGGGTACCGTGTTGATTGCTTTAGTGATGCTGTCTGTTGTGTACTGCAGGCGCACCTTTATAAGGAACTTTGTTCAagGGTGCCTGAGGTCTCAAAGTGCTGTTCGGAGGGAAGCGGGGGAGTCTGATGCCACGACTGAAACCAGAATTACTCTGAGCCCCACAATTCAGGACAAAGTGCGAGTCACGGGTCCGTCTCACCCATTCACTGCAGAGGACACGTCTCCCACCAGCTTAAGATCCTACATCCAGGCGTGTTCGTTCGCAGGGACCATGACGATGTCCCCGGATCTCAAACCTCCGTTCCTGAGGAGCTCGTCTGAAACCCAGCCTCTGATGAGAGACCTGCCGTGCGGTCACTGCTCCTCGGCCTGTTCATCTCAGAGGTCCTCCAGCTCCGGACACAGTGCCGAATATCCCTCAGAGATGTCTTCTACCCAGTGGGAATCTAAACAGGATAAAGGACCGGCCAACCTGTACTGTGCCTCTGACCAGCGCACATGTCTGCAGCACACCCCGGTCGAGTGCACCGAGATGGACTTCCAGAGTTGTGAAGCTCTTCAGGAGAGTCCTGTCCTGGTGCCAGCGGAGATGGAGGGCTGCTCTGTGGACAACAGGTCAGCGGAGCAAAGCAGCAGAGCGTCTGACAGACCTGACCTGGATACCGACGGCTGTGAGAGAACCAGTGACCAGTTCGGCACTGACAGCATCAACTGCAGTGAGATGGTTTCTAAAGTTCAGAGTCTGGTAAAGACGAGCTGTGATGTCACGCAGGGCACCATGCAGTCAAGTGTCCTAACCTACAGCTGGGTTCATCTGGGTCGGGTGCCCAAGGCTGTGGTCGAAGCCCTGTCCTTGAAGCTGGACCCATCGTTCCCGGGAGTGAAGAACTTCAGACAGGTGGGCCTGGAGCTCAGGGTCCCCGGGCAGGTGCTGGACAGCATGCGGGGCTTTGAGCACGTGTTTAACTACCTCTCCTGCAGCACGCTGAGCACCGTGCCTGACCTGCTGAACACGTTCCACCGACTGCAGAGGTTCGACGCGCTGTTCCTCCTGTGCGAATATGCCACTCAGAGACGGTTCAGTGTCTGCACCCATTAGCCGCCAGTAACACGGATGCAAATTGCTGTGGTCCAGGTGAACCAGAATGACACAGAAAAGCCAGCTAACTGCCGCAGTGTGACAGAGAGGCATTACAGCGACAGTCGGGAACGTGCAGGTCActgcttttctctctcagtgctgcaAAGAACTGCCGATAGATGAGAtgtgtcattaaaatgaaacacagatgCGCTGTTTGTCAAAGCGTGATTTCCgtgcatttaaaaatgaccaGTGTTGAAGCTACTGAACTCGTTCTAGAAATTAGAGGGATGATCGTTACTTTGTTGAGCAAAGGATGAATTtcatcagtgtttttatttgctataTATCAAGTAGGTTTGTTGTTCTGTCTGTTTTGCACTTGCGTTTCCTTCAAAAGGTCTGCAAACTTGGAGCTTGTCAATCTGTTTTGCAGTCGGATGATTTTcctgtgttatttatttcagagaAGCAATCTATTGACCAAATTTAGGCTTTTAAAAAGACAGCGATCACAATAACTCTtggaaaaagtaaaactaaTGTTCATGATACTACATGTTCTAAGAACTACTAGGAGATCTTTTAAATTGAATCTGTACCGTAATATTGACAAAAACTAATTACTGGATAATAATTCATATTGCTTTGTACTCTGGGAACTGtctataatttgtaattattttcagggacaattttttaaatacattgcttGGTCCCTCAACGTTTGAAATGTTGACCTTGATTGTCTCCTTTGATTCATTTAGCCAACATGAATGAGTTTGTGGTTTACTGTAAACAacgataaaataataattaaaaactatgaGGTTACAtttaagtgttaaaaaaaaagtgtacattaGGCCTTTTGTAACTTGGTATCCTTTTGTAAAGCTccacagatatattttttaatcattgtgtGATTTACCTGAATGTGAAAAGGATGGGGAGATAGGAATCTGACCACTATATTTAAGCCTTCTTTAAATTTCAATggtatatatgtacacaaatatgcaaacaaGTCTAGGATAGAGAGCCTGGCTGATTATCAATAAGACCTGAGGGGGTCTAGGAGCTGCAAACTGGAGCTCTGGTCATGATGTCATAGCCACACCTCAGGcttcacttgttttatttactgtgctgtgtttaaTGTATGCAGTGTGGATCACCTTTGTGTTCATTGGACATAAATAGGAGAGAAAGATGTGCATTACAAATGGAGTCCATAAGGTGACATCAAAAACAGATGTCTGACCTGGAAGAGCCCTGCAAGCTCTGATATTTGTGTATTGGCTGCACATGGTAACACAATTAGAAATATTCAAAGGGATTTGCACAACTTTAGTGGTAACACTAGAAACTAATTACAtactttgttaaaatataatgtctTGTTGTTGTAACTGATGCTTTtgattat

Function

GO: NA

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021082 True 3138 mRNA 0.47 9 2402174 2412334

Neighbor

gene id symbol gene type direction distance location
AMCG00021077 NA coding downstream 156483 2230508 ~ 2245691 (-)
AMCG00021078 NA coding downstream 225640 2157649 ~ 2176534 (-)
AMCG00021075 NA coding downstream 295288 2086626 ~ 2106886 (-)
AMCG00021072 zc4h2,LOC107557113,LOC107597258,LOC107663226,LOC107672730 coding downstream 344789 2049196 ~ 2057385 (-)
AMCG00021068 NA coding downstream 428066 1973785 ~ 1974108 (-)
AMCG00021085 NA coding upstream 110526 2522860 ~ 2576954 (-)
AMCG00021086 NA coding upstream 170996 2583330 ~ 2583617 (-)
AMCG00021091 LOC106603306 coding upstream 843045 3255379 ~ 3265211 (-)
AMCG00021092 efnb1,LOC106603306,LOC106567780 coding upstream 875660 3287994 ~ 3288740 (-)
AMCG00021105 NA coding upstream 1321422 3733756 ~ 3736353 (-)
G83422 NA non-coding downstream 47480 2353987 ~ 2354694 (-)
G83371 NA non-coding downstream 211265 2190626 ~ 2190909 (-)
G83355 NA non-coding downstream 255057 2144404 ~ 2147117 (-)
G83352 msn,LOC106567791,LOC102776036 non-coding downstream 260431 2140290 ~ 2141743 (-)
G83346 NA non-coding downstream 295776 2105064 ~ 2106398 (-)
G83441 NA non-coding upstream 98990 2511324 ~ 2511549 (-)
G83442 NA non-coding upstream 103156 2515490 ~ 2517126 (-)
G83465 NA non-coding upstream 188175 2600509 ~ 2602840 (-)
G83481 NA non-coding upstream 277636 2689970 ~ 2690210 (-)
G83499 NA non-coding upstream 529249 2941583 ~ 2954613 (-)
G83313 NA other downstream 424206 1973160 ~ 1977968 (-)
G83428 NA other upstream 44667 2457001 ~ 2459379 (-)
AMCG00021090 NA other upstream 265251 2677585 ~ 2718919 (-)
G83761 NA other upstream 2290921 4703255 ~ 4751235 (-)
G83864 NA other upstream 4132158 6544492 ~ 6546577 (-)
AMCG00021153 NA other upstream 4703086 7115420 ~ 7122491 (-)

Expression


Co-expression Network