AMCG00021110


Basic Information

Item Value
gene id AMCG00021110
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 3779821 ~ 3801007 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021110
ATGGATCCAAGTGAGCTTCCAGGGTCTTTAAACTCCTTCCAGCTAGCCAATGAAGCCTTGAGGAAGGACTTGCTGACCGCGCCGACCAACATGGAGGTGGCCAGCGGTGAATTAATGGCACTCGAGGAGTACAGCTTTCAGAATCCAGCCTCGGCGACGTCTACCCTGACCCAGTCCGAGCGGGTGAGGCAGAAGACGCAGGACAGCTTGAGCATCCTGGAGAAGCCCGATTCGCTGGAACTTTCCAAGACCCAAGTGGAGGAGTTTTACAGTAAGGTTTTCCCAGAGCCACCTGGGTCGTCCTCGGGCTCCTGGCAGGTGGACGTGCCAAAGAGGAGCGAGACTGGAGCCCCTGCGCCAAATGAAGACGAGACAGTGGATGTAAAGATGGAGACGGATCCCCAGACAGACAGTGACCCTCGGCTGCAGCTGCCTCTCGGGGAAGACCATGAAATCACATCCGTGGAGCCCGAGGCGGGAGCGACGGATGCTGTGGACGCAGAGGAGGAAGGGCGGCCCACTCTGGAAGCGTCCCCCGGTGTGTGTGACGCAGACGTGGCTTCGTCTCCCAAGAAGGACTCCTTGCCGGTGGAGAATGTATCCAAAGAAGAGCAGCGGCAAGACGTGAATGTACAGGAGATGGATCCAGAGGCAAGAGATGGACAAGTAGAGGGTCCGCCTCCAGAGGCCAGGGCAAGCCCCGTCTCTTTGAATGAGAGCAAAGCATCTCCTGGTCATCCGGTTGATGTTCCTGCTGGAAGAGGCGATGAGCCAACAGAGGGCAGCAAAGGCAAGGAAACCCAGGAGGCCAGTTCAGAAACCACGCCGGGGCTGCCGACCGCTGAAGGAGTTCAGAAGAGCCGAACGTCTGAGAAGAGTGGAGGCGCTGAGGAGTTCATCTCAGACTTCCTCGGGCACTTCGGACATGAAGGTGAGACCATTAAGACGCGGCTCTTCTGTTGCTATGAATCGCCTGCTCTCGCTCGTCTCACCCCGCGTCCCCTCACAGCCCAGCTCTCGGACGACGACTCGGACGCCATGGTGGACGACCCGCGGGACGAGGACTTCGTCCCCCACGCTGCGCCCCGCCGCTCGGCCCGCTTGCCCCTGCGTGGCCAGAGGTCCCACTCCGCCGTCCAcgccaccaccaccccccccggCGCCCCGCACAGCGCCACCCCCCACAGCGCTGCCCCCAGCCAGAGCCAGGCCGCCGCCGCACCCCCCGTGCCCAGCACGCCGCGGCCGCCCACCAGGATGCACTGCGCCAACTGCCGGGTGGCGCTGCAGAAGGGCCAGACCGCCTACCAGAGGAAGGGCATGCCCCAGCTCTTCTGCTGCTCCGCCTGCCTGTCCGCCTTCTCCAAGAAGCCCCCCAGGAAGAAGCCCTGCGTCTTCTGCAAAAAAGACATTGCGAACACAAAAGACTCTGTTGTTGCCCAGACTGGGCCATCGAACACTTTCCATGAGTTCTGTAACAACGCCTGCCTGTCTCTGTACGAAGCTCAGTTTCGAAAGAGTTCCCCCCGGATCTCGGGCTCCCCTGCCGCCAGGTGCAGCATCTGTCACAAAGCAGGAGAGaTCCAACATGAAGTGAGTAACGGCAACATGGTCCACCACCTCTGTAGCGACGCCTGCTTCAACAAGTTCAGGGCCACCAAGGGCCTGAAGACCAGCTGCTGCGACAACTGCGGCCTCTACATCTACAACAAGGGCGCCCGAGTGGAGTACCTCATCCACGAGGGGCAGCAGAAGAGGTTCTGCAACGCGTCCTGTCTGACGCTGTTCAAGAAGAAAAACACCAAAGTGTTCCCGTGCGTTTGGTGCAAGACCCTGTGCAAGAACTTCGACATGCTCCCGAGCAAGGACCGCTACGGGAAGATCCGGCTCTTCTGCTCGGTGTGCTGCATCACATCTCACAAAGTCAAGGCGGCGGGACCCATAGGCCCCGGCCGGCCCTGTAGTTTCTGCAGGCGAAGCCTCTCGGAGCCGGCGTATTACAACAGGATCAGTCGGGCCACCTATCAGTTCTGCAGTCCCAGCTGTTGGGCTAAATTCCAGAAAAACAGTCCAGAAGgagacattcatttaaattgccATTCCTGTCACAATCTGTTCAATGGCAAGCCCGAAGTCCTGGACTGGCAGggttCGATCTACCAGTTCTGCTGTAAGGAGTGCTGTGAGGACTACAAGCGGCTTCACGGCGTCGTGTCCGTCTGCGAACACTGCAAGCAGGAGAAGCTCCTCCATGAGAAGATCAAGTTCTCGGGCGTGGAGAAGAACTTCTGTAGTGAAGGCTGCATTCTGCTGTACAAGCAGGACTTCACAAAGAACCTGGGCCTGTGCTGCATCACCTGTACCTACTGCTCTCAGACCTGCAAGCGCGCCGTGACCGAGGAGCTCGACGGCAACACCTGGGACTTCTGCAGCGAGGATTGCAAGAGCAAATACCTCCTCTGGTACTTAAAGCTGCCCAGAGACAGCCCTGACTCCAAGTTTGTTTTCACAACCCCTCATGTGCAGGCGGCTCGGTGCCACGCCTGCAAGCGGCAAGGGAAGCTTCTGGAGACGATTCACTGGCGCGGAGAGATCAAACACTACTGCAACCAGCAGTGTCTGCTGCGCTTCTATAGCCAGCAAAATCAGCCCAACCTGGACACCCAGAAGGGCCCAGAGAGCCTGCTCAACAGTCAGTCACCAGAGTCTAAAACATCCACAACTCCTGCAAAGAAATTTGAATCTGCAGGGAAGACCCCCACCGCCCAGCTGCCCCCCTCGCCCCCCTCTCCCCCGCCTCCTCCGGCTCCCACCACCCCCCGCAAGAACAAGGCGGCCATGTGCAAACCCCTGATGGAGAGCCGGGGGATGTCCTGCCGGCCCGAGATGAAGTCCAAGGGTTGCCAGACAGAGGATTTCATGAACACGAAGCTGGTTGTCCTCCCTGTCCCAGTCCCTGTGTTCGTCCCAGTGCCTATGCAAATGTACTGTCAACAAACACCAGTGCCTTTCGCCCTGCCGATCCCAGTCCCAGTCCCGATGTTCTTGCCCACCACCCTGGAGAGCGCAGACAAGATAGTGGAAACCATTGAGGAGCTGAAAGTGAAAATCCCGTCAAACCCACTTGAGGCGGACATCCTCGCCATGGCGGAGATGATCGCCGAGGCCGAGGAGATGGATAAAGCCTCGTCGGATCTCTGCGATCTGGCCAGTGATCAGAGCGCAGAGGGCTTACTGGAGGACTGCGACCTGTTCGGACCGGCGAGAGATGACGTCCTCGCCATGGCCGTCAAAATGGCAAATGTTTTGGATGAACCGGGCCAAGATTTGGAAGCAGATTTCCCCAAAAATCCTCTAGATCTCAATCCAAGTGTTGACTTCCTGTTTGACTGCGGGCTCGTGACCCCAGACGATGTCCAATCGGATCAGGAGCTGCCGCGGGCCGTGCGGAAGGGATCGAAGAGGCTCCTGCTGTCCGAGAGCTGCTCCAGGGACTCGGGCAACAGCCAGACAGGCAGCACGGGCCTCAATCACACCTACGGAGTCAACGCCTGGAAGTTCTGGGTCCaaacaaagcattctgggaatGAAGCCGGAAAAAACGAAGAGCTCAGATTTGGCCCAAAACCCATGCGAATTAAAGAAGACATCCTGTCTTGTACGGCGGCGGAGTTGAACTATGGACTCGCGCAGTTCGTGAAGGAGATCGCCCGGCCCAACGGGGAGCGCTACGAGCCAGACAGCATTTACTACCTGTGCCTGGGAATCCAGCAGTATCTTCTGGAGAATAATCGGATGGTCAACATCTTCACTGATCTGTACTACCTGACGTTCGTGCAGGAGCTCAATAAGATCCTGAGCGGCTGGCAGCCGGGGATATCGCCCAGTGGTGGGATACTGTCGCGTGTGGAGGAGGAGCACCTGTGGGACTGTAAGCAGCTGGGCGTCTACTCGCCCTTCGTGCTGCTCAACACACTCATGTTCTTCAACACCAAGTACTTCAGGATGCGCACGGTGGAGGAGCACACCCAGCTGTCCTTCACCAACGTGGTGCGCCAGTCCCGGAAGAGCTCCACGGCGCGGGGCGTCGTCAAGAGGGTCAGCGTGCGCTACTGGCCGCCCGTGCGCCACAAAAAGGCAAAGGAGAGCGGCGTGGGGAAGAGGAAACGCGAGGAAGAGCCGTCGGACCTCGAGCAATGGGAAAACAGGATGAACCCGCTGAGATGCCCCGTGAAATTCTTCGAATTCTACCTTTCGAAATGCCCCGACAGCATGCGGAACCGGACAGACGTGTTCTACCTGCAGCCCGAGCGCTCCTGCATCGCCGAGAGCCCGCTCTGGTACTCGGTCATCCCCATGGACCGCAGCATGCTGGAGAACATGCTCAACCGCATCCTGGCCGTGAAGGAGATCTACGAGGACCATTCCCGAGAGGCGCTGGACGAGGACGTCGACTGA

Function

GO: NA

KEGG:

id description
K24675 ZMYM2_3_4; zinc finger MYM-type protein 2/3/4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021110 True 4458 mRNA 0.59 23 3779821 3801007

Neighbor

gene id symbol gene type direction distance location
AMCG00021105 NA coding downstream 43468 3733756 ~ 3736353 (-)
AMCG00021092 efnb1,LOC106603306,LOC106567780 coding downstream 491081 3287994 ~ 3288740 (-)
AMCG00021091 LOC106603306 coding downstream 514610 3255379 ~ 3265211 (-)
AMCG00021086 NA coding downstream 1196204 2583330 ~ 2583617 (-)
AMCG00021085 NA coding downstream 1202867 2522860 ~ 2576954 (-)
AMCG00021111 NA coding upstream 9404 3810411 ~ 3813043 (-)
AMCG00021109 NA coding upstream 15686 3816693 ~ 3825283 (-)
AMCG00021115 LOC106567772,LOC106603301 coding upstream 436030 4237037 ~ 4260026 (-)
AMCG00021116 NA coding upstream 461022 4262029 ~ 4281357 (-)
AMCG00021118 NA coding upstream 481344 4282351 ~ 4291721 (-)
G83608 NA non-coding downstream 28919 3748658 ~ 3750902 (-)
G83607 NA non-coding downstream 32309 3747158 ~ 3747512 (-)
G83602 NA non-coding downstream 44614 3734677 ~ 3735207 (-)
G83596 NA non-coding downstream 61631 3710153 ~ 3718190 (-)
G83539 NA non-coding downstream 357375 3422202 ~ 3422446 (-)
G83667 NA non-coding upstream 320242 4121249 ~ 4121486 (-)
G83673 NA non-coding upstream 324484 4125491 ~ 4125701 (-)
G83764 NA non-coding upstream 938089 4739096 ~ 4739884 (-)
G83773 NA non-coding upstream 1021051 4822058 ~ 4859229 (-)
G83833 NA non-coding upstream 2174467 5975474 ~ 5975781 (-)
AMCG00021090 NA other downstream 1060902 2677585 ~ 2718919 (-)
G83428 NA other downstream 1320442 2457001 ~ 2459379 (-)
G83313 NA other downstream 1801853 1973160 ~ 1977968 (-)
G83761 NA other upstream 902248 4703255 ~ 4751235 (-)
G83864 NA other upstream 2743485 6544492 ~ 6546577 (-)
AMCG00021153 NA other upstream 3314413 7115420 ~ 7122491 (-)
AMCG00021249 NA other upstream 8292470 12093477 ~ 12100854 (-)
G84814 NA other upstream 8726086 12527093 ~ 12527694 (-)

Expression


Co-expression Network