G83499


Basic Information

Item Value
gene id G83499
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 2941583 ~ 2954613 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU104192
agatgaaattcaatgtggacaagtgcaaggtattacatgcaggtaacaaaaatgtccactataatgacactatgggaggaatagaactagatgaagtaacgcatgagaaagacctaggagtctacgtggacaatttggggaagcaataaaaaaggcaaacacaatgctggggtatattgtcaaaagtgtagagttgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccttggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaactgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaaaaaactccccagcgatgtggctgaagagacaatttgggaa

Function

GO:

id name namespace
GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity molecular_function
GO:0140103 catalytic activity, acting on a glycoprotein molecular_function
GO:0008375 acetylglucosaminyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104192 True 629 lncRNA 0.45 2 2941583 2954613

Neighbor

gene id symbol gene type direction distance location
AMCG00021086 NA coding downstream 357966 2583330 ~ 2583617 (-)
AMCG00021085 NA coding downstream 364629 2522860 ~ 2576954 (-)
AMCG00021082 NA coding downstream 529249 2402174 ~ 2412334 (-)
AMCG00021077 NA coding downstream 695892 2230508 ~ 2245691 (-)
AMCG00021078 NA coding downstream 765049 2157649 ~ 2176534 (-)
AMCG00021091 LOC106603306 coding upstream 300766 3255379 ~ 3265211 (-)
AMCG00021092 efnb1,LOC106603306,LOC106567780 coding upstream 333381 3287994 ~ 3288740 (-)
AMCG00021105 NA coding upstream 779143 3733756 ~ 3736353 (-)
AMCG00021110 NA coding upstream 825208 3779821 ~ 3801007 (-)
AMCG00021111 NA coding upstream 855798 3810411 ~ 3813043 (-)
G83481 NA non-coding downstream 251373 2689970 ~ 2690210 (-)
G83465 NA non-coding downstream 338743 2600509 ~ 2602840 (-)
G83442 NA non-coding downstream 424457 2515490 ~ 2517126 (-)
G83441 NA non-coding downstream 430034 2511324 ~ 2511549 (-)
G83422 NA non-coding downstream 586889 2353987 ~ 2354694 (-)
G83512 NA non-coding upstream 81684 3036297 ~ 3056152 (-)
G83517 NA non-coding upstream 133081 3087694 ~ 3087955 (-)
G83539 NA non-coding upstream 467589 3422202 ~ 3422446 (-)
G83596 NA non-coding upstream 755540 3710153 ~ 3718190 (-)
G83602 NA non-coding upstream 780064 3734677 ~ 3735207 (-)
AMCG00021090 NA other downstream 222664 2677585 ~ 2718919 (-)
G83428 NA other downstream 482204 2457001 ~ 2459379 (-)
G83313 NA other downstream 963615 1973160 ~ 1977968 (-)
G83761 NA other upstream 1748642 4703255 ~ 4751235 (-)
G83864 NA other upstream 3589879 6544492 ~ 6546577 (-)
AMCG00021153 NA other upstream 4160807 7115420 ~ 7122491 (-)
AMCG00021249 NA other upstream 9138864 12093477 ~ 12100854 (-)
G84814 NA other upstream 9572480 12527093 ~ 12527694 (-)

Expression


Co-expression Network